tebp (tebp)


Basic Information

Item Value
gene id tebp
gene name tebp
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 67622423 ~ 67625977 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001124524.2
CTAGGATTGATATTTACATTTTGCCCTGTCGTTTTTTGCTACAGAAGAGAATATCCAACAACACATCGTGGTTAATACTGCGGTCTGGAGTGGGAAGAAATAGATAGCAAGAGATGCAGCCAGCAACAGCGAAGTGGTATGACAGAAGGGACTCTGTCTTTATTGAGTTCCTGGTAGAAGACAGCAAAGATCTACAAGTGAAGTTTGAAAAATCAAAACTTGATTTCCGTTGTGTTGGTGGGATTGAAACCCTCAAACACCATAATGAATTGGACCTTTTCGACTCAATTGATCCCAATGCATCGAAGCACAAACGTACAGACAgatcagtgttgtgttgtctgaaGAAAGCAGAGGCAGGAAGAGCATGGCCACGGTTAACAAAAGACAAGGCAAAATTTCAATGGCTGGGTGTCGACTTCAACAACTGGAAAGACTGGGAAGATGATTCTGATGAGGATCTGTCCAGTTTCGACAAGTTCTCAGAGATGATGAATACGATGGGAGGAGAAGACGGCATGCCAGATCTGGGCATGGGTGGTATGGAAGGTCTCGAAGAGCACGACAGCGATGATGAAAAGATGCCAGACCTGGAGTAATGGTGCATATAAAGTCTGTAACCGATGACGACAAGAAATGAAAGCCTCAAAGGTCGGTTGAAGAGAGAGACGAGTTGAGTTGGTAACCATATTTGAAAAAGGAGGAAATATCAGCAGTTTTCCAAACACGTCAGAGGAACCTCACTGAGGAGAGACTGTATCTGTCGTCATGGCATCGCAGCAGAGCATTCTCCAGCCAATGTCTTAGTGCTGTGCTTTGCTGTTCTAATTCTGCATGGACAATTCAGTTGTTTCCATGATGTGCTGTGGGGTTCAGTTATACCGTGCTTTAACTTAACAACCAGGGGTGCCTTCAGCAAGGAACAGTGTTatggaacgttcagatagaatTACGTCATGTCGAACAAAGGTGCCACTGACATGTAGAATGAAGGAATCGTGTCGGCTCATCGTATTTCAATCTGCAACGTTTGACAATGTTTTCCTACTGAATGTGGCCCCGCTCTGATGGGATAGTCTGAAAGTTACTCTCCACCTTTTTATTTAATAACGTCAGTGAGGTTACGTATTGAATATCAACATAATTGTAAATTCTAACAGaagaaaaaatatgttttaaaacaACTGCCTATTTTCAATAAAGTTGTTTCTTTTTTTTAGTGAGAAA

Function

NR:

description
progesterone receptor-related protein p23

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0050220 prostaglandin-E synthase activity molecular_function

KEGG:

id description
K15730 PTGES3; cytosolic prostaglandin-E synthase

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001124524.2 True 1227 mRNA 0.42 8 67622423 67625977

Neighbor

gene id symbol gene type direction distance location
LOC110532729 LOC106572697 coding upstream 4309 67607673 ~ 67618114 (+)
LOC110532726 LOC106572718 coding upstream 104426 67480352 ~ 67580588 (+)
LOC110532722 LOC106572704 coding upstream 344120 67263564 ~ 67278303 (+)
LOC110532719 ssrd coding upstream 572538 67045197 ~ 67049885 (+)
LOC110532716 LOC106572708 coding upstream 580329 67028029 ~ 67042094 (+)
LOC110532731 LOC106572722 coding downstream 92200 67718177 ~ 67755296 (+)
LOC110533034 LOC106572723 coding downstream 142363 67768340 ~ 67772836 (+)
LOC110533035 LOC106572734 coding downstream 279054 67905031 ~ 67911226 (+)
LOC118965940 LOC106572726 coding downstream 296680 67922657 ~ 67934517 (+)
LOC110532736 LOC106572735 coding downstream 473716 68099693 ~ 68111105 (+)
G833905 NA non-coding upstream 1895 67620312 ~ 67620528 (+)
G833868 NA non-coding upstream 23331 67540008 ~ 67599092 (+)
G833888 NA non-coding upstream 36131 67585284 ~ 67586292 (+)
G833880 NA non-coding upstream 66594 67555381 ~ 67555829 (+)
G833908 LOC106572695 non-coding downstream 6395 67632372 ~ 67633330 (+)
G833910 NA non-coding downstream 10271 67636248 ~ 67636799 (+)
G833918 NA non-coding downstream 41079 67667056 ~ 67667801 (+)
G833942 NA non-coding downstream 104127 67730104 ~ 67730382 (+)
G833906 LOC100194703 other upstream 1057 67620878 ~ 67621366 (+)
G833541 NA other upstream 408539 67213420 ~ 67213884 (+)
G833241 LOC106572720 other upstream 687936 66931688 ~ 66934487 (+)
G833139 LOC100380641 other upstream 800784 66814464 ~ 66821639 (+)
G833100 LOC106613929 other upstream 862750 66759278 ~ 66759673 (+)
G834099 NA other downstream 422936 68048913 ~ 68049222 (+)
fance fance other downstream 591101 68213202 ~ 68218960 (+)
G834228 NA other downstream 642060 68268037 ~ 68268408 (+)
G834235 NA other downstream 661238 68287215 ~ 68288525 (+)
LOC110531253 LOC106572751 other downstream 840582 68451084 ~ 68470509 (+)

Expression


Co-expression Network