LOC110533034 (LOC106572723)


Basic Information

Item Value
gene id LOC110533034
gene name LOC106572723
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 67768340 ~ 67772836 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021617161.2
AGCCCCTCTCTCTCAAAGTGTCTTGAAGCTACAGTAGTGTGTGAAGTACCTCTCTCTCCCAGATAGGGTTTTGGGGCCGTGTGTTCACTACAATAGACTTCAGCTCCCAGCGGTTCCTCTTGCTAGAAAAAGACTTCCAAGGACCACTTCTGCTGCTGTACATTCTAAAAGTGAGGGGACCTGACCAGACCCAGACGCAGGGATGTGTGGTTCAGTGTGGTGTCTGCTGCTTCTGTTGCTCTGTCCTGGTACTGATGAGATGGTGCTGGAGGACAAAGCcttagccagccagtcaggGTGGCGTACATATGAGCTGCAGAGAGGACAGAATGGCATCAACAGCTTCAAAAGGCATTCAGACGGAACGTTCACCAATGACTACACCCACTACCTGGATAAGATCAAGGCTAAAGACTTCATACAGTGGCTGGCCAGCACCAAACGAGAGAAATGCAAGGAGCTTCCCCTCAACCTAGAGGGGGTGTAAGAAGACCCAGACACCACCAGAAGTGCCACAAGGACGTTTCCTAGCTACTTAACATCAtatacagcagtggaggctgttgagcggagaacggctcataataatggccggaacagagcaaatggaatggaatcaaagacctggaaaccatgtgtttgatgtatttgatacccttccactgattccgctccagtcattaccacaagcctctcctccccaattaaggtgccaccaacctcctgtgatggacAGTATCATAAAACAGGACCTTCTACCaacgaaaaataaaaaataagacagTTTCCTGTCTTTGGTTTATGTTGTGGTAAATTACACAGAATCCTGGACATTATTTCTGAATTGTATTGTAGGCTGTACACTCTGTGCGAACAGGCTGCTCTGATTTTCTACAGCAAGGAGCTGATCACCTGAAATATGAACATGAAAATAATAACAGAAATGGAGTTTGGAATGCCACAGAACGTAAATCTCAGGTCTAACAACTTACGGTAACTCTTCATTAAAAGCCATGTTACCATTTTGGTTTTCAAATAGGTCTGCAGAATCCGCATCAATCAAATTGGAAGGACAGTTTGGTCAGAGATAGAGCAATCTAAAATGTTTGTATACATCTGTATAAATTAAAATAAGGGTTTATATTGGATGATGATACTGCATTATGAAAATTGAATATGTAAATATTTACTGTGAGAGGTATTTAATTTGGAGCATGAA

Function

NR:

description
glucagon-like

GO:

id name namespace
GO:0005102 signaling receptor binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021617161.2 True 1219 mRNA 0.44 4 67768340 67772836

Neighbor

gene id symbol gene type direction distance location
LOC110532731 LOC106572722 coding upstream 13225 67718177 ~ 67755296 (+)
tebp tebp coding upstream 142363 67622423 ~ 67625977 (+)
LOC110532729 LOC106572697 coding upstream 150226 67607673 ~ 67618114 (+)
LOC110532726 LOC106572718 coding upstream 250343 67480352 ~ 67580588 (+)
LOC110532722 LOC106572704 coding upstream 490037 67263564 ~ 67278303 (+)
LOC110533035 LOC106572734 coding downstream 132195 67905031 ~ 67911226 (+)
LOC118965940 LOC106572726 coding downstream 149821 67922657 ~ 67934517 (+)
LOC110532736 LOC106572735 coding downstream 326857 68099693 ~ 68111105 (+)
LOC110533037 NA coding downstream 437343 68210179 ~ 68212326 (+)
fance fance coding downstream 440366 68213202 ~ 68218960 (+)
G833959 NA non-coding upstream 3401 67764718 ~ 67764939 (+)
G833949 NA non-coding upstream 26078 67741829 ~ 67742262 (+)
G833947 NA non-coding upstream 28565 67739554 ~ 67739775 (+)
G833945 NA non-coding upstream 30131 67737990 ~ 67738209 (+)
G833972 LOC106572784 non-coding downstream 33862 67806698 ~ 67808863 (+)
G834092 NA non-coding downstream 266913 68039749 ~ 68040023 (+)
G834095 NA non-coding downstream 270299 68043135 ~ 68043342 (+)
G834097 NA non-coding downstream 274906 68047742 ~ 68047960 (+)
G834098 NA non-coding downstream 275366 68048202 ~ 68048403 (+)
G833906 LOC100194703 other upstream 146974 67620878 ~ 67621366 (+)
G833541 NA other upstream 554456 67213420 ~ 67213884 (+)
G833241 LOC106572720 other upstream 833853 66931688 ~ 66934487 (+)
G833139 LOC100380641 other upstream 946701 66814464 ~ 66821639 (+)
G833100 LOC106613929 other upstream 1008667 66759278 ~ 66759673 (+)
G834099 NA other downstream 276077 68048913 ~ 68049222 (+)
G834228 NA other downstream 495201 68268037 ~ 68268408 (+)
G834235 NA other downstream 514379 68287215 ~ 68288525 (+)
LOC110531253 LOC106572751 other downstream 693723 68451084 ~ 68470509 (+)

Expression


Co-expression Network