LOC110533035 (LOC106572734)


Basic Information

Item Value
gene id LOC110533035
gene name LOC106572734
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 67905031 ~ 67911226 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021617162.2
gttttaatcagaaaaccaggtgttttaatcagTATGTTTACTTTGATATTGACCTTACATCGATTATGATAAGCAGAGTAAAGGTGTTTACTTTTGCCATACTCGGCCTACTGTGATAATCTGTTTCATATGTGATCAGTAGTGCGCATGCTTGACCTGCATAACTTTCAACTGAAATTTACATTCTACATTTCCATTATTCTGCGATGGTGATGACAGCATGCGGACAGCGGCCATTGGCAGACGCTCCAGGAGGGTCACGTGTTGTTGGAGGGCGCAATGCACCTTTGGGTGCATGGCCTTGGCAGGTCAGCGTGCAGGTGAGGTCCTGGCACCTCTGTGGCGGGACCATCCTCAACAGCCTCTGGGTGCTCACCGCTGCACACTGCTTCACTATCGTTCCACCCCATAGGAGGTCCAGTCTGCGCGTGGTGGCAGGACTCAACGTGCTAACAGAACCAGGGCAGTACTCCCAGCGCCGCTATGTTGTGGAGGTCAGAGCCCATGAGAAGTTCCACCACCCCAGCTACTCCAACGACATAGCTCTTCTGCGTCTCAGCTCTCCACTGGAGTACACAGACTTTGTCCAGCCTGTCTGTACAGTGGAAGACGAGATGGAGGAGTTCAACTTAAACCTCAACCAGTGTTTCATCAGTGGTTGGGGCAGCACTTCTTTCAAAGGAAAGCCAATGGACACACTGCAAGAAGCTGAGGTGGAGCTGTTTGAGCGAAATACTTGCAACCAGATCGACTGGTACAACGGTTACATCAAGAATGGCATGATCTGTGCTGGCTCTGAGACCGGGGGGGTCGACACATGTCAGGGAGACAGTGGAGGTCCACTCCAGTGCTTCAGTGAGGATCAGGAAAAATTCTACATTGTTGGCGTGACAAGTTTTGGGGATGCCTGCGGATTGCCTAAAAGACCCGGAGTGTATACTATGGCCAGCAAGTACTCAGCCTGGCTGAAGACAACTCAGTCAAGATCCCTGTCAGCCGTCTGTCAGCTAGATAACCATTTCATCTTAGTCCTGTCCAGTGTAGTTTCTAGACTTATCTGAATGAGGTGAACTGCTGAATCTAGTCCAGTGTTTGACATAAACTACTCTCTCATGGATGGTCATTACATTTTGATGACTTTACATTGTCAATAGTTCTGTCACTTCTCAGGAGTAGCCTAAATAAACCATATTATTCAAAGGCTCTGTAGGCTATATTTGATGGGTCATTTCAACAATTTAATGATTGTTGAAGGATAAACCTGTGAAATGCCAAAAGGCCATTGTTTCCACTGTCTTACTTTATCATAGTAGCCCATTAAAACATTAGCTAGGCCTTAAGGAACATGAAATTAAATGTTGTAGCATACTAATAATTTCTTGAGAGaattctatactattatattccTTG

Function

NR:

description
acrosin-like

GO:

id name namespace
GO:0008233 peptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021617162.2 True 1410 mRNA 0.46 4 67905031 67911226

Neighbor

gene id symbol gene type direction distance location
LOC110533034 LOC106572723 coding upstream 132195 67768340 ~ 67772836 (+)
LOC110532731 LOC106572722 coding upstream 149916 67718177 ~ 67755296 (+)
tebp tebp coding upstream 279054 67622423 ~ 67625977 (+)
LOC110532729 LOC106572697 coding upstream 286917 67607673 ~ 67618114 (+)
LOC110532726 LOC106572718 coding upstream 387034 67480352 ~ 67580588 (+)
LOC118965940 LOC106572726 coding downstream 11431 67922657 ~ 67934517 (+)
LOC110532736 LOC106572735 coding downstream 188467 68099693 ~ 68111105 (+)
LOC110533037 NA coding downstream 298953 68210179 ~ 68212326 (+)
fance fance coding downstream 301976 68213202 ~ 68218960 (+)
LOC110531252 NA coding downstream 346494 68257720 ~ 68258742 (+)
G833972 LOC106572784 non-coding upstream 96168 67806698 ~ 67808863 (+)
G833959 NA non-coding upstream 140092 67764718 ~ 67764939 (+)
G833949 NA non-coding upstream 162769 67741829 ~ 67742262 (+)
G833947 NA non-coding upstream 165256 67739554 ~ 67739775 (+)
G833945 NA non-coding upstream 166822 67737990 ~ 67738209 (+)
G834092 NA non-coding downstream 128523 68039749 ~ 68040023 (+)
G834095 NA non-coding downstream 131909 68043135 ~ 68043342 (+)
G834097 NA non-coding downstream 136516 68047742 ~ 68047960 (+)
G834098 NA non-coding downstream 136976 68048202 ~ 68048403 (+)
G834105 NA non-coding downstream 145890 68057116 ~ 68057343 (+)
G833906 LOC100194703 other upstream 283665 67620878 ~ 67621366 (+)
G833541 NA other upstream 691147 67213420 ~ 67213884 (+)
G833241 LOC106572720 other upstream 970544 66931688 ~ 66934487 (+)
G833139 LOC100380641 other upstream 1083392 66814464 ~ 66821639 (+)
G833100 LOC106613929 other upstream 1145358 66759278 ~ 66759673 (+)
G834099 NA other downstream 137687 68048913 ~ 68049222 (+)
G834228 NA other downstream 356811 68268037 ~ 68268408 (+)
G834235 NA other downstream 375989 68287215 ~ 68288525 (+)
LOC110531253 LOC106572751 other downstream 555333 68451084 ~ 68470509 (+)

Expression


Co-expression Network