LOC110532803 (LOC106572868)


Basic Information

Item Value
gene id LOC110532803
gene name LOC106572868
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 71906991 ~ 71955546 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036988925.1
CATCGGATGCTGAGCTTGTGACTGAGACAACCGACTGTAACTGGTAAACCGGCGGATGACCGAGAACAACAGTTGACGACACACTCTCCACTGCTCAGTGCTTACATGCCAACTAATAATATTCAGTATAGTAACGTTACATAGTCCATCTCTTGATTTTGCGCTCAGCAGACTGTTTCGGTTCAGAAAATCCAAACACGAAGCAGTAAAGCTCACCGGTCAACGAAAAGCGAGCAGCAGAGAGAAGACTAGCCTACCAAGTCGGACATTATCACAATTCTCAACCAAGAGGTCGGAATCACTTGAATGCGAAGATGACAGACGCGGTCGTAGACGGTAAATTGGAGCTGGTGAAACAGGCAACGAAATATGTAAAAGAGACCGAGAACGTCGCGGAAAAATATTCTGCGATGACTGTTAGCAAGAACAGCGACATGAACATGAATGTCGGTGAATTGCAGTCCGCCGCATTCACTGCGGTGCCCACTCTCAAATCTGTCAAGAAGATCCAGTTTGCGGAGGATAAACAGGAGTTTCAGAAGTACCCCACTAAGGCCGGCCggcgctccctgtctcgctccatCTCCCAGTCCTCCACAGATAGCTACAGCTCAGCTGCGTCCTACTCAGACAGCTCAGATGACGAGACCTCTCCTCGGGACAAGGCCCAGGCCAACTCCAAGGGCAGCAGTGACTTCTGCGTTAAGAACGTCAAACAGGCAGAGTTCGGCAGACGGGAGATCGAGATCGCAGAGCAAGATATGTCAGCCCTGATCTCGCTGAGGAAGAGAGCCCAGGGGGAGAAGCCTCTAGCTGGGGCGAAGATAGTGGGCTGCACCCACATAACAGCTCAGACTGCAGTTCTGATAGAGACCCTGGTAGCTCTTGGAGCTCAGTGTCGTTGGACAGCCTGTAACATCTACTCTACTCAGAACGAGGTGGCTGCTGCCCTGGCAGAGACTGgTGTGCCTGTGTTTGCGTGGAAGGGCGAGTCAGAGGATGACTTTTGGTGGTGCATCGACCGCTGTGTCAACACGGAAGGCTGGCAGGCCAACATGATCTTGGATGACGGAGGGGATCTGACCCACTGGGTTTATAAGAAGCACCCCAGCGTGTTCAAGAAGGCTCAGGGCATCGTGGAGGAGAGTGTCACTGGAGTCCACAGGTTGTACCAGCTGTCCAAGGCAGGCAAGCTGTGTGTCCCGGCCATGAATGTGAACGACTCTGTTACCAAGCAGAAGTTTGACAACCTCTACTGCTGCAGAGAGTCCATCCTGGACGGTTTGAAGAGGACCACTGATGTGATGTTTGGGGGGAAacaggtggtggtgtgtggttATGGAGAGGTGGGGAAGGGTTGCTGTTCTGCTCTGAAGGCCCTGGGAGCCATCGTCTGCATCACAGAGATAGACCCCATCTGCGCCCTGCAGGGCTGCATGGATGGGTTCAGGGTGGTGAAGCTGAATGAAGTCATTCGTCAGATGGACCTGGTGATAACCTGCACAGGCAATAAGAACGTGGTGACCAGAGAGCAGTTGGACCGGATGAAGAATGGCTGTATTGTCTGCAACATGGGACATTCCAATACCGAGATTGATGTGGCCAGCCTGCGGAGCCCGGAGCTTACCTGGGAGAGGGTGCGTTCTCAGGTGGACCATGTGATCTGGCCCGACGGCAAGAGGGTTGTCCTGCTGGCTGAGGGTCGTCTTTTGAATCTGAGCTGTTCTACAGTGCCTACATTTGTCCTGTCTATCACAGCCACTACTCAGgCCCTGGCTCTGATTGAGCTGTTCAATGCTCCTGAGGGACGCTACAAACAGGATGTCTATCTGCTGCCTAAGAAGATGGATGAGTATGTGGCCAGCTTGCATCTGTCCAATTTTGACGCCCACCTGACAGAGTTGTCTGATGAGCAGGCGAAGTACATGGGTCTGAACAAGAACGGCCCCTTCAAACCCAACTACTACAGGTATTGACAGGAATGGACAATGCGGTGACCTGCAACCAACAtctgagggagagaaaaaaaaacaagattAATTCTCTattttattttctaaattgttACAAAAGGGAAGAATAATTATTTTGCTTTTATGCcgaatctaaaatgtattattaacACTGTCgggcataataataataacataatatCTAACTTGTCTGTTAGGTATATTAATCAATTCATGCATTTCAATCATATGAAACAAGAGCAGAAACCAATAtgtatgttccaaatggcaccctattccttatatagtgcacttctttagaccagagccctataggccagggtcaaaagtagtgcaccaactAGAGTAaaaggttccatttgggacgtactCCAAGAGAAGTAaccataaacaaaaaaaaatgtcagtcaTATATTTTAAAATACTCTGTTTGCATGATTTTATCTTAAAAAATGATTAATTAATTGTTGCTAATGCTAATTGTTGCTAAATCACAATGTTTATTAGTggcggctggtgggaggagctataggaggagggGCTTATTGTAATGGTTGGAACGGAATACATGTAACGGTataaaacacatcaaacatatggtaaTCACATTAGACTCCGTCCCATTAATTCCATTCCTGTCATTACAATGATCCCGCCctcttatagctcctcccaccagccaccactgacgTTTATTCATGGTTAATTGTCAATGTGCTGTAGTTTTATCTGCTCCTGAAAGTCATATGGTGGCGCCAAGTTATTGGCCGTACAGttagagaggagaatgagagggatatgtttccacacacacacacacattgtcagcGCACTGACATCTTAAATAAAGTACATTCCATGAGCCAGAATTGGTGTTGTGAGCTCTTTTTTTTTAATGTCTAATACAGTATTTGACAAGTGTTTCATAACTGAAACAAGGCCTTGATGAAACTCGCTGACTGGTATCTGCATACATACCTGCCATTTAATGTCAGAGTGTGAATATGCCTTCTGAGCCATTTGCTTATCAGGTGACCTTCAACATTCAGTTCAACTAATTTGATAAGAGGTAATATATTTGAAAAATTCCAAGATTTTAGATTTGAGGTTATTTTCAAGTTCTAGAAGAGGTCTGTTGGCCTACAGTGACCTACTATATATAATCAGGTTTTATCTGCTTCTGTTCATTGTTAAATAAGTTATGTGTCAACGTGTGATAAGGTACACTTCATATGTTCGCCTTAGACTATTTCTGCTTCCATGTCCTTTTTTGATCAAGTAGAGGATTTATACTTCTCTTGTGACTGTTGTATCTATTCGATATCAGCAATAAACTCTAAATACTAAATAAAAACATACAATTTG

Function

NR:

description
S-adenosylhomocysteine hydrolase-like protein 1

GO: NA

KEGG:

id description
K01251 E3.3.1.1, ahcY; adenosylhomocysteinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036988925.1 True 3338 mRNA 0.46 17 71906991 71955546

Neighbor

gene id symbol gene type direction distance location
LOC110532805 LOC106566386 coding downstream 1217 71901581 ~ 71905774 (-)
LOC110532802 kcnc4 coding downstream 7243 71834204 ~ 71899748 (-)
LOC110517102 LOC106572846 coding downstream 313837 71583494 ~ 71593154 (-)
rbm15 rbm15 coding downstream 338201 71563276 ~ 71568790 (-)
prok1 prok1 coding downstream 466473 71432065 ~ 71440518 (-)
LOC110531271 nfya coding upstream 4992 71960538 ~ 71980385 (-)
LOC110531272 LOC106572865 coding upstream 29588 71985134 ~ 72035813 (-)
LOC110532812 LOC106572857 coding upstream 250900 72206446 ~ 72222104 (-)
LOC118966115 NA coding upstream 280582 72236128 ~ 72238619 (-)
eps8l3b LOC106572888 coding upstream 353235 72308781 ~ 72328432 (-)
G838082 NA non-coding downstream 9013 71897006 ~ 71897978 (-)
G838062 NA non-coding downstream 68286 71838486 ~ 71838705 (-)
G838059 NA non-coding downstream 74973 71831505 ~ 71832018 (-)
G837942 NA non-coding downstream 100345 71806427 ~ 71806646 (-)
G838113 NA non-coding upstream 27089 71982635 ~ 71985080 (-)
G838139 NA non-coding upstream 82317 72037863 ~ 72038077 (-)
G838144 NA non-coding upstream 86179 72041725 ~ 72042232 (-)
G838152 LOC106572864 non-coding upstream 87733 72043279 ~ 72046152 (-)
G837952 NA other downstream 84654 71821597 ~ 71822337 (-)
LOC110531265 plagl2 other downstream 1478033 70427951 ~ 70479312 (-)
G836619 NA other downstream 1697366 70208678 ~ 70209625 (-)
LOC118966109 NA other downstream 1822294 70082681 ~ 70084697 (-)
G835808 NA other downstream 2475091 69431567 ~ 69431900 (-)
G838204 NA other upstream 163115 72118661 ~ 72119287 (-)
G839372 NA other upstream 1071429 73026975 ~ 73028966 (-)
G839553 NA other upstream 1505809 73461355 ~ 73463040 (-)
rs21 LOC106572905 other upstream 1769706 73725252 ~ 73732414 (-)
G840404 NA other upstream 2746771 74702317 ~ 74703252 (-)

Expression


Co-expression Network