XLOC_026782 (aatka)


Basic Information

Item Value
gene id XLOC_026782
gene name aatka
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 51899578 ~ 51912019 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00052110
CTTCCTTGTACAATGTACTACCAGACTGAAGAAGTTGCTCTTCATCTGTACTCTTGTTTATCTGCTGAATAATGATGGTTCAAGGTATTTGGAACCAGAGTTTGCTTCTGAACTAGTTTTCCATTTTATATCCAGATAGATGAGCTGATATCCATGGTTTTGACGATCATTCTGTcaaaagttaacttttttttctttagatcATCTATTCTTCAGGTCTCTGTCCTTTCTAAATGCATGTTTTCTCTCTGTTCCTCTCAGTTCAGCTCCTGAAATCTGCAGATCTTGGACGTCACAGCCTTCTCTACATAAAAGAAATGGGACACGGCTGGTTTGGAAAGGTTTTGCTAGGGGAGGTGAATGCTGGACTCAGTACCACACAGGTGGTGGTTAAGGAGCTAAAGGCCAGTGCCAGTGTACAAGAGCAGATGCAGTTCCTGGAAGAGGTCCAACCTTATCGTGTGCTCCAGCATCCAGCCCTCCTGCAGTGTCTTTCCCAGAGTACAGAAGTCACGCCCTACCTACTGGTTATGGAGCACTGCCCTCTGGGAGATGTTAAAGGATACCTCAGAAGCTGTCGGGCTGCTGACTCAGTAACCCCTGACCCTTTAATCCTTCAGCGGATGGCATGTGAGATTGCTTCTGGCCTTTTGTACCTCCACAAACACAATTACATTCACAGTGACCTGGCCCTTAGAAATTGCCTGTTGACCTCAGAGCTGGCTGTGAAAATCGGAGACTATGGCCTCAGCCATAGCAAGTACAAGGATGACTATTATGTGACAGCAGATCAAATATGGGTTCCTCTACGCTGGATTGCACCCGAACTTATTGATGAAGTCCATGGAAATCTCTTAGTAGTGGATCAAACCAAGGCCAGCAATGTCTGGTCACTAGGTGTGACGATATGGGAGTTGTTTGAACTCGGTAATCAGCCTTACAGGCACTATTCTGATAGGCAAGTTTTAACATATGCTGTAAAGGAACAGCAGCTCAAACTGCCAAAGCCCCTGCTGAAAGTGCCTCTGTGTGAACGCTGGTATGAGGTCATGCAGTTCTGTTGGCTGCAGCCCGAGCAGAGGCCGGTCGTGGAGGAAGTTCATCTCCTGCTAAGCTACCTGTGTTCTAAGGGTGAGACAGAGGTTGAGGAAGACTTTGAGAAGCGCTGGAACTCTCTCAGGCCAAGTCTGGGCTGTGGCAGCTCTCACAGGACACCTACACCTGAAGTAGCCTCTTCAGCTTCCTCGTCATTTCCTCTACTTGAACACTTCTCTATGGCAGACAGCTTCCAATCTGAGAATGGGGATGATATTTTGACAGTAACTGAGACCAGCCAGGGACTCAACTTTGAGTATAAATGGGAGCAGGCACGAGCTGAGCAGCCCTACTGCTCCTCTTCCGCCAGTGGACCATTGGGAAAAAATAATCCCCATTACCAGGATGTTTATTACCCTCTTTGCAATTCCACAGGTAGCTGCAAAGGTGAAAGCCTCCCTCTTGGGGTCTCTCCATCTTACTATGAATCAGATCATCCAGGAGTGGTCCCAGTACTGAGTGCACACAGCCCCTCAGTAAGTAGTGAATACTACATCCGCATTGAGGAGCCAGTTGAGTGCAACATCAACTTAGAAGACACAGATCTTGATTATAGCCCAACAGTTGAAGCCAGTAACAGCAGCTTGTCCTCTGCAGGCAAGAGGAGTCTGATTGGGTCTCAGCCAAACTCATACTGGTCTGCAGCTAAAGAACCCATCAGTAATGATTATGATTCAGATAGCAGCCTAACCATGGAGCCACTCCAAAGAAGAGTTCCAAGCTCAGTAGAGATAGACCAGTCGGAAGCATATTTATCTTCCAATGACAGGCAACATTTTCAATGTGAACAGTCACCAAAAAAAGGACCAGATGTTAATTTGATAAGAAGACAGGGTTCAGATTCAAATCTGCAGAGAAGAGGGTCAGGAAGCCATAGACTGGAGGTGGTTGATGACAGCCCTCTTGGCATGTCAGTCTCATTTAGTAGTCCCAGCTTGGCACATTGTGATCCATACCTTGAACCAAACCAGAGAACTGCAGAAAGAAGTAGGGCAAATGAGGCCTATTATGACATGATGAGCCCTTTACAAAAAAATGTGCCTAGACCGCACTACATGAGCATTGATATTGATGCTGGTGATGGTCTTCTTTTGGGTAGGGGGAGTGTCGAAGATGATGATGATCTGTTTTCTCAAAGCATGTTAAGCAACTGGAATTCCAACCACTCAGCAAACAACAACAGTTTAAGTGACCGTAGGCAAGCTGTGGGTTTTcaagatgcatattttgatttacGTCACCCAACACCCTCCTCTCAAATTGGGAGTTTGAAATCAAGAACACTGGAAATAAGCAACAGTTTCACATACAATTCCATCGATTCTCTCAAAGTCCACTCATACATGGAGGCCACTGACAGTACACCCACCTCCAGCAACTCTCACACTGATTCAGATGCTGGTGAGTATCTACACTTATGCCCTGAAGGTACTTCGGGTGTTGAATCATCTGCCAAATGTCATTCTGTTACAGAAAGtctacacactcatacacggcAGAAAAACATTGCtcataaacatataaaaaacagTACATCAGATTTACATGTAGGAGGTTGTAGCATACTTAATTCATCAACTCTTTCAACTGAGATTGTAGATGTTAAAGAAAGCATGTTAGTTGAGACAAGGATATCCCCGGCACAAAAATTAAATCTAGCAACCGATAGTTTTGGAGTGTGTGTAAAAATGGTGTCATGTTCGAAGGATACATCCAAGAGTGTCTTAGAGTTTAACCGTTTGACAGACAGTGGCATGGTACCTGAGAACTCTAATATAACTTTGGTGGAAATTAATGACTGTAAAGATGACTGCCCTGATATCCCCTCTGGAGTATTAGTAGATTATCCACTGGACTATGCAGAGGTGGGCAATATTGACCTAGCTCATGGACCACCGCAGAGAGTAAACAGGCCTAGACAGGCAGAGGACACAATTAACATTGCTTCTAGCTGCAGTCCATGTGAGGCCTTCAGCCCAGATAGTTACCAGACTCCCATTCAGCCAAAATCCCTCGACAGTGGCTATGACACAGAGAACAACGAATCCCCAGAGTTTATCTTAAAAGACCTTGAAGGGAATCCAGCCCTTAGCACCAGTGTAGAATCAGATGAGAGTGACATGGTGCTCCAGATGGACCTGGATGAAGATGTCAACGTAATGCTTCTTCATCCATCCAGCAGTCATCTACCCCTGATCAGCCTTAGTGAGAGGAATCAGTACAGAGACTCTGCTTATTTTTCTGACTATGACATGGAGAATGACAAAAGCCCTTGTGAAGGAAGCAGCAACTTCTTCAGTCGTCATGAGGGGGATGACATCTTTCAGCTAAAAGCAGAAAAACAGGACTCAGAAAAAAGAGTTAGAAGAGAAGGACATGGCACAGAAAGTGAGAAGGGATATGACATCTCCATGTCAAAGGACAAAACTGCTGGCCTTCATGCTAAGCAGTCAAGTATTAAAAAGACAATCTCAAATATGTGTTCGTCCCCTACAATGGTTCCAGTGATTTCCACACTTTCCCCCTTTCCTCCAGAGATGGGGGGTTGCTTGACCAAGGAATCAACTCCAGATGACGGTATTGGATTGGAATCTGATCACTCTGGTGAAGAACCAAACTCTGATTGCTATTCGTCCACAACACCTGAAGGGTCTTCCTCAACACAGGAGGCCTCAGGCATGGAGGAGCAGGCTAATGGAGACTCAAAAGATTTTTCCTCAGCAAAATCACTAGGCTCAGACTCTACCATAGTAGACTTCAGTGGAGAGATTATACAAGAGGAAGAGCAAGACATCTGCAACAATGTGGACAATCCAGAACTTCTAATGGAAGAACACAATGAGGATAATATAGAGGTAAATGAGGATTCCATGGAAGGCAGCAGCATAGAAGAAACACTTTCAAAATCAAGGCGTGATGAATCATTAGAGAGGATTCTTCCAGCCTTGCCAGAGGATCTTGATGTCCCAGCACCACTGGGAAACGTAGAGGAGGCAGATGAGGAGGATTCAGAGGATAGTGATGAGTCTGACGAGGAACTTCGTAGCTACAACATACAGGAGCAGAGTGATGAGAGTGACGAAGAGTTCCCTGTGGTTCCTGTCATTGTGAGTGACCGTAGCAGTGCACGGCATCTACGCAGCCTCCTCAAAATGCCTTCCATACTTACACAGTCCTTCTGTAATGAGTTGGAGAGTAAGAAAAAGGTGGTGTCGTTCTTTGATGATGTCACCGTGTTTCTGTTTGACCAGGAGAGCCCCACGGGTGATCTCGGGGACTACAGTTTTCCTGTGGAGGTAGAACCCAATGGTCAGGCTTCAGATGTGGAGCTGCCACGACCACAAGATGGGGTCACTTCTTATGAGGATTCATCAGAAAGAAATGCCTCGGAAGAAAGTGAAACCTTTCAGTGGCAAGACGATTTACCATTAATGCCCAGTCCTTCAACATCAGAGCCTGGCTCTGAAGAGATCACTACTCCACCCAACTCTCCAGTCAAATCTCCAGATGTAAAACCAGCACCACCACTTTCTCGATTTAGTGTCTCTCGTTTTTCCATTACGCATGTGTCTGACCCTGACATGGACTCCATGGGAGGTAACAGTGAGAATGGAGCCCAAGAGTGAAGTGGCCATTACCCTTTTAATTGAAGAGGTGTAAGAACCTTTGTGGTTTGACTCGGTCTTATCAAACTGAACGctattctgtattttttttacattctggACTAAAAAGACCTGTTAACCTGATATGCTGTTTGGTCACAGTGCCTCATCCTGTAGTGGATTAGCCAGCCCCTCCGTTGTGTTTGTAGACAGATGGTGGTTGAGTGACAGTCTTTTGAGGACAACAGTTTAAAGAACAGAGATCTTTACAACACAGCATATTTATTATCTATGTATCAAAAACATGATTTGTGAAGATTATAACTTATTTGCACAATTCAGTAACTGTATCATGCTgaaatcattcttttttttttgcacataaccCGTAGGAAATAATATAGATACAAGTCTGCTCTCCTCATCTGCTTGTCATCCTCCATATTGTCAATATGTGGTTTAGAGTCCGAGATACTTGTCATAATGCTTTATGTGTTTTTTAGATTGACCCAATGAGCTGCAAATAATAAGAGCTATGAAAGGTTCTGCCCAATAAAATAGTCCCCTATTTAAATTAATGGAATTGAGCAAGAGAAGAGACCACTTTTGTCTAAGCTTTAGCTCAGGGGTGTCAAGGGTATGTATCTAAATTAGGTTATTTTAACGAACACACTTTAAAGTACTCATACTGTCTTATGTTCtgctttgtttaaatgtacaatgTACAAAAGCACTCTCATAGTGTGAAATATCGTTTATACACCTCTTATAATCAAAACTCAAATTAATATATCATTATGCAGTTTAATCAATAGCAAATTAGTTATTCGCCTGTTAGATCTTAAGATCCCTAGATTTCTATGTAAATTTCaggaatattttaaagaatgaagtAATGCATTGCAGTACGTGTTTGTTCAGAAAAGTAATGACAGTATTCCAGGAGAACAGGCAGTAAAGCAACATTCTATTATGACAGCTTCAATACATTATAGTTTGCACATGGGTCATTCCTGTTATGCAGCCGTTGAAACTACTACAAaaagaataatattaaaataataaaatcatgaaACATTCTGGGTGTTCAGAAGTCGGTGTCTTTAGGTGAGAATGTCTTTGTTCAATTAGAAAAATACATCCAAATAAACTTAGAATCAATCATTATTGGTTACTAGAGATGTTACGATTACCGACTCCAATTCGACACAATTCACAATACTAATCTCACAATTCACGATTTTGTCACAATTTctttaaactaaattatttaacacAAATTTAAGATGAATTAGAGCCCTTTCATTTTTTCATAAGTGCT

Function

symbol description
aatka Predicted to enable protein tyrosine kinase activity. Predicted to be involved in brain development and peptidyl-tyrosine autophosphorylation. Orthologous to human AATK (apoptosis associated tyrosine kinase).

GO:

id name namespace
GO:0038083 peptidyl-tyrosine autophosphorylation biological_process
GO:0006468 protein phosphorylation biological_process
GO:0007420 brain development biological_process
GO:0005524 ATP binding molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0004713 protein tyrosine kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-100812-4 Predicted to enable protein tyrosine kinase activity. Predicted to be involved in brain development and peptidyl-tyrosine autophosphorylation. Orthologous to human AATK (apoptosis associated tyrosine kinase).

Ensembl:

ensembl_id ENSDARG00000078222

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00052110 True 6021 mRNA 0.43 11 51899578 51912019

Neighbor

gene id symbol gene type direction distance location
XLOC_026781 NA coding downstream 1795 51892719 ~ 51897783 (-)
XLOC_026780 NA coding downstream 239522 51625603 ~ 51660056 (-)
XLOC_026779 BX005299.1 coding downstream 351328 51548133 ~ 51548250 (-)
XLOC_026778 NA coding downstream 450617 51445490 ~ 51448961 (-)
XLOC_026777 NA coding downstream 625855 51259831 ~ 51273723 (-)
XLOC_026784 BX908776.1 coding upstream 151982 52064001 ~ 52090004 (-)
XLOC_026785 NA coding upstream 282604 52194623 ~ 52196824 (-)
XLOC_026786 BX897682.1 coding upstream 303026 52215045 ~ 52217251 (-)
XLOC_026787 trim35-13 coding upstream 695020 52607039 ~ 52614747 (-)
XLOC_026788 si:dkey-210j14.3 coding upstream 729718 52641737 ~ 52644737 (-)
XLOC_026793 NA non-coding upstream 1162828 53074847 ~ 53076911 (-)
XLOC_026796 NA non-coding upstream 1318691 53230710 ~ 53232495 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000033_01792241_01801250 AATKA coding CI01000033 null 1792215 ~ 1801271 (-)