XLOC_026783 (dre-mir-338-3)


Basic Information

Item Value
gene id XLOC_026783
gene name dre-mir-338-3
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 51907486 ~ 51907562 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00052111
GGTGTCTCCTGGCAACAATATCCTGGTGCTGCCTGAGTACATCTCACAGACTCCAGCATCAGTGATTTTGTTGCCGG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000081891

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00052111 True 77 miRNA 0.52 1 51907486 51907562

Neighbor

gene id symbol gene type direction distance location
XLOC_026781 NA coding downstream 9703 51892719 ~ 51897783 (-)
XLOC_026780 NA coding downstream 247430 51625603 ~ 51660056 (-)
XLOC_026779 BX005299.1 coding downstream 359236 51548133 ~ 51548250 (-)
XLOC_026778 NA coding downstream 458525 51445490 ~ 51448961 (-)
XLOC_026777 NA coding downstream 633763 51259831 ~ 51273723 (-)
XLOC_026784 BX908776.1 coding upstream 156439 52064001 ~ 52090004 (-)
XLOC_026785 NA coding upstream 287061 52194623 ~ 52196824 (-)
XLOC_026786 BX897682.1 coding upstream 307483 52215045 ~ 52217251 (-)
XLOC_026787 trim35-13 coding upstream 699477 52607039 ~ 52614747 (-)
XLOC_026788 si:dkey-210j14.3 coding upstream 734175 52641737 ~ 52644737 (-)
XLOC_026793 NA non-coding upstream 1167285 53074847 ~ 53076911 (-)
XLOC_026796 NA non-coding upstream 1323148 53230710 ~ 53232495 (-)

Expression


Co-expression Network