zgc:194242


Basic Information

Item Value
gene id zgc:194242
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 77847293 ~ 77854016 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036989289.1
ACAGAGATCATAAGACAGTATGATCCTCGTTAACATATGAGACAGACTTCACATGGAGAATCATCATAGGTCAATTTACTTTTGCACTATACGCTTTTTGTTAGACTAGAACAATATTTTGAGAACTGGATCATTTTGGTTAAGTACTTATTGGGTCACTATCTGAAGAAACTGGTTGAATTTTGTGAACCCGACTGAGTCTCCGAAAAACAGGGGTCTAACCACCTCTTGATCACACAGGCAAAGCGGGCGTTCGCATTTTAGACACCAGGAACCAGAGGTGATTAGCAATTCAAGGAAAAACAGCCAAGTACCAGTTACAATATATTGAGTCCATACACAGAGTTGGAAGTGTATAAAGATATTGGAATTCGGAATCCATAGCTGTGAGAATACCAATTACAGGAAAGTGACCAAGGGGCGGAGCATTAAAGatgATCTTATTAGAGAAGCTGGGGCAGCAGTTGGGTCATCCCACCCGGTCAGTGTATGGTTGGCTGATCACTAAGTTCCTGAAGTATCACAACAAGATGTTAGAGGAGAGTGCGGTGTCTCTGTCTGGGATCCAGCCTGGAGATACAGTGTTAGAGCTGGGCCACGGGCCAGGTCTGGGCCTGAAGGCTGCAGCCACACTGCTGACAGAACCTACTGGGAGACTCATAGGAGTGGACTACTCACAATACATGcacaagATGGCAGGTGATCTTCTGAAGGAGTTGGTGTCCAATGGGAAGGTGTCTCTGTATCAGTGTGATGTGGCAGCCATGCCTCTAGCAGACAATATGGTAGACAAGGTGTTCCACTGTAATTGTTACTACTACTGGCCAGACCTGAGGAAGGGAGCTGCAGAGATACACAGAGTCATGAAACCAGgaggtgtgatggtgaccACTCTGAGACTGAGCAGAGTGGTCAGCTTTGCGTCCAGGAGGGAGTTCCCTGGACTGAACTGGCAACCCGAGGCCTACATGGCAGCTCTGAGAGCCTCTGGGTTTAACCAGGTCACAATGGAGGatcatcaacacagacacatcaCCTACCAGGCCATTTACGCTACTGCTGATAagtgatgaacacacacaccatcatttgTCATTCAGGAATCGAGGATCACtttcttttttaaataaatagctgtggattgtttcaTATCACAAAGCTCGTTGGCCTCTGCCTGTTAGGGCAGCGTGGCAACATGCCAAGCTGATTACCGAGTTGTGAAAAACATCTAGAATATGTGAAGTCGTGTCTTGAGTATAATAAAAAATGTTGacacaggagatataggagagtctctctctccagaatggctcagtagggcaggggtgtgtggtgaagatataggagagtctctctctccagaatggctcagtggggcaggggtgtgtggtgaagatata

Function

NR:

description
uncharacterized protein LOC111669017

GO:

id name namespace
GO:0032259 methylation biological_process
GO:0008168 methyltransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036989289.1 True 1400 mRNA 0.46 4 77847293 77854016

Neighbor

gene id symbol gene type direction distance location
ngfa LOC106592688 coding downstream 121958 77698100 ~ 77725335 (-)
LOC110531298 LOC106572998 coding downstream 154243 77644076 ~ 77693050 (-)
LOC110531295 LOC106572974 coding downstream 302905 77454472 ~ 77544388 (-)
LOC110529252 LOC106592002 coding downstream 479210 77358028 ~ 77368083 (-)
LOC110532861 LOC105006798 coding downstream 492135 77267361 ~ 77355158 (-)
LOC110532870 NA coding upstream 199183 78053199 ~ 78058388 (-)
etv7 LOC106572981 coding upstream 226380 78080396 ~ 78105379 (-)
LOC110531300 lgr6 coding upstream 270659 78124675 ~ 78227314 (-)
LOC110531296 NA coding upstream 401933 78255949 ~ 78263583 (-)
cfap126 cfap126 coding upstream 640747 78494763 ~ 78496678 (-)
G842881 NA non-coding downstream 11314 77828833 ~ 77835979 (-)
G842886 NA non-coding downstream 11892 77834237 ~ 77835401 (-)
G842858 NA non-coding downstream 82556 77764101 ~ 77764737 (-)
G842853 NA non-coding downstream 89509 77757581 ~ 77757784 (-)
G842850 NA non-coding downstream 95286 77751784 ~ 77752007 (-)
G842925 NA non-coding upstream 33555 77887571 ~ 77887937 (-)
G842965 NA non-coding upstream 67178 77921194 ~ 77930977 (-)
G842973 NA non-coding upstream 88865 77942881 ~ 77943208 (-)
G842982 NA non-coding upstream 93790 77947806 ~ 77948011 (-)
G842986 NA non-coding upstream 95534 77949550 ~ 77950183 (-)
G842859 NA other downstream 80453 77766311 ~ 77766840 (-)
G842543 NA other downstream 481933 77365019 ~ 77365360 (-)
G842449 NA other downstream 803898 77042589 ~ 77043395 (-)
G842978 NA other upstream 92132 77946148 ~ 77946428 (-)
G843107 NA other upstream 227132 78081148 ~ 78081551 (-)
G843375 NA other upstream 588210 78442226 ~ 78442622 (-)
G843824 NA other upstream 901524 78755481 ~ 78757103 (-)
G843909 NA other upstream 1148380 79002396 ~ 79005105 (-)

Expression


Co-expression Network