LOC110532870


Basic Information

Item Value
gene id LOC110532870
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 78053199 ~ 78058388 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021617022.2
GTAAACGGAAACAGAACAAAAAGACGTTCATCCTTCCTGTTACAACTCTCACAACGGACCGACGTTTAGCGTCTGTTTCAGACTTCAAAATGCGTTACGTGGCCGCCTACCTGTTGGCAGCGCTGGGTGGCAACAACAACCCCAGCAGTCAGAACATCAAGGACATCCTGGGCAGCGTTGGCATCGAGGCTGACGACCAGCGCCTGGCTAAGGTCATCAGTGAGCTGATGGGAAAAGACATCAATGAAATCCTGAACGCAGgaatGTCCAAGTTGGCCTCCGTGCCAGTAGGGGGGGCTGTGGCGGTGTCAGCGGCTGGTGgatctgctgctgttgctcctgggGCCGCTCCTGCCTcgcaagagaaggaggaggagaagaaggaggagtcTGAGGAGTCAGATGAAGACATGGGTTTTGGTCTCTTTGATTAGTTTTCTTTCTGACCTTtgttaaaaacatgttttgcttTTCTACCTTTCTAACTAGAGAACAAAGAAGCCCTTTCCTTAACTAGAGAACAAAGAAGCCCTTTAAGTAGAGAACAAAGAGAACTTTTCCTTTGTACATttgttaaagaagcaataaagtTTGTGAAATTAA

Function

NR:

description
60S acidic ribosomal protein P2

GO:

id name namespace
GO:0006414 translational elongation biological_process
GO:0005840 ribosome cellular_component
GO:0003735 structural constituent of ribosome molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021617022.2 True 603 mRNA 0.48 5 78053199 78058388

Neighbor

gene id symbol gene type direction distance location
zgc:194242 NA coding downstream 199183 77847293 ~ 77854016 (-)
ngfa LOC106592688 coding downstream 327864 77698100 ~ 77725335 (-)
LOC110531298 LOC106572998 coding downstream 360149 77644076 ~ 77693050 (-)
LOC110531295 LOC106572974 coding downstream 508811 77454472 ~ 77544388 (-)
LOC110529252 LOC106592002 coding downstream 685116 77358028 ~ 77368083 (-)
etv7 LOC106572981 coding upstream 22008 78080396 ~ 78105379 (-)
LOC110531300 lgr6 coding upstream 66287 78124675 ~ 78227314 (-)
LOC110531296 NA coding upstream 197561 78255949 ~ 78263583 (-)
cfap126 cfap126 coding upstream 436375 78494763 ~ 78496678 (-)
rpl10 rl10 coding upstream 463010 78521398 ~ 78525835 (-)
G843009 NA non-coding downstream 83159 77966685 ~ 77970040 (-)
G842986 NA non-coding downstream 103016 77949550 ~ 77950183 (-)
G842982 NA non-coding downstream 105188 77947806 ~ 77948011 (-)
G842973 NA non-coding downstream 109991 77942881 ~ 77943208 (-)
G842965 NA non-coding downstream 122222 77921194 ~ 77930977 (-)
G843106 NA non-coding upstream 9875 78068263 ~ 78068627 (-)
G843159 NA non-coding upstream 49449 78107837 ~ 78108259 (-)
G843166 NA non-coding upstream 62659 78121047 ~ 78123386 (-)
G843295 NA non-coding upstream 219936 78278324 ~ 78278889 (-)
G842978 NA other downstream 106771 77946148 ~ 77946428 (-)
G842859 NA other downstream 286359 77766311 ~ 77766840 (-)
G842858 NA other downstream 288605 77764101 ~ 77764737 (-)
G842543 NA other downstream 687839 77365019 ~ 77365360 (-)
LOC110532861 LOC105006798 other downstream 698071 77267361 ~ 77355158 (-)
G843107 NA other upstream 22760 78081148 ~ 78081551 (-)
G843375 NA other upstream 383838 78442226 ~ 78442622 (-)
G843824 NA other upstream 697152 78755481 ~ 78757103 (-)
G843909 NA other upstream 944008 79002396 ~ 79005105 (-)
G843915 NA other upstream 1001749 79060137 ~ 79062180 (-)

Expression


Co-expression Network