etv7 (LOC106572981)


Basic Information

Item Value
gene id etv7
gene name LOC106572981
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 78080396 ~ 78105379 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036989118.1
CGTCATACATTTTGGGCACCAGGCGTCCGTATAGCCTCTCCAGAAAACAACACGCACTCAATTTAGATATTCAGGATTGAGTTCATGGAAGTGATATCTGCACTTGTTTTTAAAACACACACCTCTATGGATCCTTTCGATTTCGATACCCGGAAACAAGGATCATATGTCATCATAGTTGTCGGGTTGCATGTGGAAATCATGTCCAGCTCCTACGTTTGGATTCCATAATAATTTATTCGGACCCTTAATCGAAAGAAGTCTTATAGAGAGAATTAATCGTATTACCGGTCGGATTGTTGATCACCTGAGTTGAGGAATCTATAGAGAATTATTCTACTAGTCcggacagacaggtagaggaCGATGGAAGACGGAGGTAGCTCCCCGCCTGATCTGATCAAGGACCATGGAGAACCCAGTCATGTTCTCACTCCCCTAGCCCCTGGCAGAGGAGTGCTGTTCCCTTCATCGCTCCTTCCTCCCTgctctaccctcctccctccagtCATCCCCCCTTCACAGGACGACCTGTGGCAGCTACCTGGAAGACTACgtataaACCCGTCTCTGTGGGACAAGGAGGACGTGGTCCACTGGCTGCACTGGGCTCAGAGGGAATATTCTCTCCTCAGAACTGAGAGGGGACGGTTTGAGATGAACGGCAGAGCTCTCTGCCTCCTCACCAAGGAAGACTTCAGACGCCGCTGTCCTGACTCAGgtGATGTACTGTACGAGCTCCTACAGTGTGTGAAGCAGCAAAGAAGGGAGGTCTCCGCATGCCACACAACTCCACCCATCCTGACCCTCACCAAGCCCCCTCTCAGTCTCACCAAACTCCCCTCTACTAAATACACCCAGCCAACCCAAACCAATGGAAGCCATGGTCCCCAACCCCTAGGAGCCAATGGATCAACACaTGTGTCGAAGTGTCATCCCACAATCCCTAGCTCCCAGGAGGAGGAGCCTCTCAACCTGTCCAATCAggagaggactgagagagaagtCCCACCTAGAGAGGCCAACGGCAAGatcccagaCTGCAGGTTGCTGTGGGACTATGTGTACCAGCTGTTGTCAGACCAGCGCTACCAGCCCTTCATCCGCTGGGAGGACCAGGAGAGCCTGGTGTTCAGGGTGGTCGACCCCAACGGACTAGCTCGACTCTGGGGGAACCACAAGAACCGAGCCAACATGACGTATGAGAAGATGTCTCGTGCTCTGAGACACTACTACAAACTCAACATCATCAAGAAAGAACCAGGACAGAAACTACTCTTCAggTTCCTGAAGACCCCTCAGGAGATCAAGCGACACAGAGTGGACCGCCTCGACTCAGCAGATTCCCCTGAACACTCACCCTCACACTCACCCTCACACTCACCCCGGCGGGACTTCAGTGAGGATGGTTTGGAAGTGTCCCCTGAATACAGCGCCCCAAGCTCTAACCCCCTAAGCATGACAGTATGAACATGGGTACTCCTGTGTTGAGGTATTGGCTCTCTTGCACTGTGAAATGGCTATGTTTTTGTGGCAGTAATCTACAACCCACTATCACACTGTGGAAACTTTATGGTGGTGCTGTGTAGCTAATGACTagcgtccc

Function

NR:

description
transcription factor ETV7-like

GO: NA

KEGG:

id description
K03211 ETV6_7, yan; ETS translocation variant 6/7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036989118.1 True 1606 mRNA 0.52 8 78080396 78105379

Neighbor

gene id symbol gene type direction distance location
LOC110532870 NA coding downstream 22008 78053199 ~ 78058388 (-)
zgc:194242 NA coding downstream 226380 77847293 ~ 77854016 (-)
ngfa LOC106592688 coding downstream 355061 77698100 ~ 77725335 (-)
LOC110531298 LOC106572998 coding downstream 387346 77644076 ~ 77693050 (-)
LOC110531295 LOC106572974 coding downstream 536008 77454472 ~ 77544388 (-)
LOC110531300 lgr6 coding upstream 19296 78124675 ~ 78227314 (-)
LOC110531296 NA coding upstream 150570 78255949 ~ 78263583 (-)
cfap126 cfap126 coding upstream 389384 78494763 ~ 78496678 (-)
rpl10 rl10 coding upstream 416019 78521398 ~ 78525835 (-)
LOC118966237 NA coding upstream 416349 78521728 ~ 78521860 (-)
G843106 NA non-coding downstream 11769 78068263 ~ 78068627 (-)
G843009 NA non-coding downstream 110356 77966685 ~ 77970040 (-)
G842986 NA non-coding downstream 130213 77949550 ~ 77950183 (-)
G842982 NA non-coding downstream 132385 77947806 ~ 77948011 (-)
G842973 NA non-coding downstream 137188 77942881 ~ 77943208 (-)
G843159 NA non-coding upstream 2458 78107837 ~ 78108259 (-)
G843166 NA non-coding upstream 15668 78121047 ~ 78123386 (-)
G843295 NA non-coding upstream 172945 78278324 ~ 78278889 (-)
G843296 NA non-coding upstream 177895 78283274 ~ 78284609 (-)
G842978 NA other downstream 133968 77946148 ~ 77946428 (-)
G842859 NA other downstream 313556 77766311 ~ 77766840 (-)
G842858 NA other downstream 315802 77764101 ~ 77764737 (-)
G842543 NA other downstream 715036 77365019 ~ 77365360 (-)
LOC110532861 LOC105006798 other downstream 725268 77267361 ~ 77355158 (-)
G843375 NA other upstream 336847 78442226 ~ 78442622 (-)
G843824 NA other upstream 650161 78755481 ~ 78757103 (-)
G843909 NA other upstream 897017 79002396 ~ 79005105 (-)
G843915 NA other upstream 954758 79060137 ~ 79062180 (-)
G843967 NA other upstream 1015564 79120943 ~ 79159161 (-)

Expression


Co-expression Network