Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118966138 |
| gene name | LOC106573004 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 79226535 ~ 79234703 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036989154.1 | False | 2092 | mRNA | 0.39 | 5 | 79226535 | 79232208 |
| TU960602 | True | 2478 | lncRNA | 0.35 | 4 | 79231515 | 79234703 |
79,216,000
79,217,000
79,218,000
79,219,000
79,220,000
79,221,000
79,222,000
79,223,000
79,224,000
79,225,000
79,226,000
79,227,000
79,228,000
79,229,000
79,230,000
79,231,000
79,232,000
79,233,000
79,234,000
79,235,000
79,236,000
NC_048573.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118966137 | LOC106573004 | coding | upstream | 51965 | 79107187 ~ 79174570 (+) |
| LOC110516429 | LOC100380643 | coding | upstream | 494052 | 78553341 ~ 78732483 (+) |
| ccnq | NA | coding | upstream | 715383 | 78499887 ~ 78511152 (+) |
| ap4b1 | ap4b1 | coding | upstream | 737622 | 78447533 ~ 78488913 (+) |
| LOC118966133 | NA | coding | upstream | 775787 | 78449307 ~ 78450748 (+) |
| LOC110532880 | LOC106573007 | coding | downstream | 78085 | 79310293 ~ 79324120 (+) |
| G843669 | NA | non-coding | upstream | 63856 | 79155596 ~ 79162679 (+) |
| G843680 | NA | non-coding | upstream | 98289 | 79121531 ~ 79128246 (+) |
| G843676 | NA | non-coding | upstream | 98811 | 79125614 ~ 79127724 (+) |
| G843738 | NA | non-coding | upstream | 172559 | 79052448 ~ 79053976 (+) |
| G843807 | NA | non-coding | downstream | 34460 | 79266668 ~ 79266910 (+) |
| G843809 | NA | non-coding | downstream | 35813 | 79268021 ~ 79268323 (+) |
| G843810 | LOC106593432 | non-coding | downstream | 38562 | 79270770 ~ 79275193 (+) |
| G844042 | NA | non-coding | downstream | 100860 | 79333068 ~ 79333346 (+) |
| G844043 | NA | non-coding | downstream | 102825 | 79335033 ~ 79335351 (+) |
| G843678 | NA | other | upstream | 68126 | 79138052 ~ 79158409 (+) |
| G843741 | NA | other | upstream | 169466 | 79056634 ~ 79057069 (+) |
| G843633 | NA | other | upstream | 374483 | 78848290 ~ 78852052 (+) |
| G843440 | NA | other | upstream | 564243 | 78661982 ~ 78662292 (+) |
| G844164 | NA | other | downstream | 200296 | 79432504 ~ 79433205 (+) |
