XLOC_002681 (depdc5)


Basic Information

Item Value
gene id XLOC_002681
gene name depdc5
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 17171604 ~ 17222083 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00004982
TGCTGTTTCTGctaaatatatgttaaattattCGCCGTcggtgtataaataaatgttaacactGTACATCATAAACTTGTGTCTTAGAATTATCATAAGTCGGGATGGAAATAGCGGGTCACGCGACTTGTAAACAACCAGGAGGATGACGATGACAGGCAGTCAAGAGATTGATTGTGCTTCTTCTTTTTCAAGCTCTTTAAATGGGTTTTAAAACTTCTGTTCACTCATATCACGTCGACTGGGAGATTTTGGACATGGGAATGTTGATATTCTGCAAACTGCTGAACAGCACTGGACTTTTTTCTGCATGTAAATAAGGATAAATGAGTGTGTAATTGTACAACTAAAGTCTAAAATGACGGTCACCATGAAGGCAAACAAGTCCTACAAGCTTGTGGTGCACAAGAAGGGCTTTGGAGGCAGTGATGATGAGCTGATGATGAACCCTAAAGTATTTCCTCAAGTTAAACTGGGGGATATTGTCGAAATTGCACATCCAAATGATGAGTACAGtcCTCTGTTGCTACAGGTGAAGAGTTTGAAAGAGGACCTGCAGAAAGAAACTATCAGTGTCGATCAGACTGTGGCTCAGGCTTTCAAGCTGCGTGCCTACCAAGACGTCATCATCAATATTGTGGATCCAAAGGAGGTGACTTTGGATCTGGTGGAGCTCACCTTTAAAGATCAGTATATTGGGCGAGGAGACATGTGGCGACTAAAGAAGAGCTTAGTGAGCACATGTGCATATGTGACACAGAAAGTAGAGTTTGCAGGAATCAGGGCCCAGGCCAGTGAATTGTGGGTAAAAGGAGAAAAGGTCACTTGTGGCTACATTAGTGAGGATACACGGGTGGTCTTTCGCTCCACCTCTGCGATGGTTTATATATTCATCCAGATGAGCTGTGAGATGTGGGACTTCGATATCTACGGTGATCTTTATTTTGAGAAGGCTGTCAATGGTTTCCTTTCAGATCTGTTTGCCAAATGGAAAGAGAAGAACTGCAGTCATGAGGTGACAGTGGTGCTGTTCTCTCGCACCTTCTATTCTGCCAAAACACTGGAGGAGTTTCCAGAGAGCCAAAGAGCATCAGTTCGACAAGACCATGAAGGCCGCTATTATGAGGATTTCTACAGGGTGGTGGCCCAGAATGAAAGGCGTGATGAGTGGATGTCTCTCCTTGTTACCATTAAGAAGCTCTTTATACAGTATCCTGTACTGGTGCGGCTTAAAGGAGCAGATGGATTTCCATGTGGACACAACTCCACTTCTGCTCAAGGAAATTACCTGGAAGCAATCAACTTGTCTTTCAAtgTGTTTGATAAGCACTACATCAACCGTAACTTTGACCGCACTGGTCAAATGTCAGTGGTCATAACTCCAGGAGTGGGTGTTTTTGAAGTCGACCGATTGCTCATGATCCTCACCAAACAGCGCATGATTGACAACGGCATTGGTGTTGATCTGGTGTGTATGGGAGAACAGCCCCTTCACGCTGTTCCACTCTTCAAGTTGCATAACCGCACAGTACATGGAGACTCCAGAATTGGTGATGATTACAACCTGCCTCACTGGATCAACCACAGCTTTTACACATCAAAGAGTCAAAACTCTTGCAGCTGTTTTACACCTCGGATCAAGCTGGCTGGAAAGAAGGTTCATGCTGAGAAAGCCAAAAACAGCAAAGAACATTctcTTGGCGCTCCCAAAGATGCTGAGAACAGCCTTCCCATCCAGGTGGATTATGATGCGTATGATTCTCAGGTCTTCAGGCTTCCTGGGCCCTCCAGAGCTCAGAGGTCCACCAACTTTAGGTACATTAGACAAATGAAAAACATAGATTCAAAGCTTAGAaggtacttaaaaacaaacagCTCTCCTCCAAACCGCCATACAGGACCAGATGAACAGAGGAGCCTGGCGTCAGATGACAGTTTGGGCCACATGTCCAACATCCTGCTCATCCCACGTCCAGCTCAGGGCCAATACGAGGTCAGCAGCTCTCTGGGCTACACCAGCTGCACAAGAGAATTGTTGGAAAAAATGGTAGAATCTCAAAGGGACTCCAGTGCTCCGGGACGCTTTACCGTAGGAAGTGCTGAGTCCACTCTACATGTGCGGCCGGGTGGTTATACACCCCAGAGGGCCCTCATCAACCCGTTCGCTCCCTCACGCATGCCTATGAAACTCACATCCAATCGCCGCCGCTGGATGCACACGTTTCCCGTGGGTCCTTCAGGAGAGCCGATTCAGATCCACCATCAGACGCGTCAGAACATGGCTGAGCTGCAGGGCAGTGAGCAGAGAGACCCGGCTCGTACCTCTGCTGAGCTGCTGGAACTGGCCTATCATGAAGCCACAGGAAGTAAGCGGACAGCGTCCCGTCATGCTGGAGAGAATGGACTGTACATCAGTGGAGTTCCGGACAACATctctggaagcccagctaGAACACCAGTGAACCGTGGTTCCTTCGAGGATTATTCCGGCAGTCTAGATCCGATGCCTAGTTTCTGCTGCACAGTCGGGGTGGACTGGAAGTCCCTCACCACTCCTGCCTGCCTCCCCCTTACCACCGATTACTTTCCCGACCGGCAAACCCTGCAGAATGACTATACAGAGGGATGCTACGACCTGCTGCCACACACTGACCTCGAGAGACGTGATGACGAGACTCCAGTGATGACGGCCCATCAGGTGTTTGAAGAGTTCATCTGTCAGCGACTGATGCAAGGCTACCAGATCATTGTACAGCCCAACAGGAAGCCACAGCCTGCTATAGCCCCGCCCCTCAGCAGCAGTCCCCTGTATTCCAGAGGGCTGGTGTCTCGCCGTAAACCAGAAGAAGAAGAGAGTCTTTACTGGCTCAGTATGGGCAGAACTTTTCATAAAGTCTGTCTTAAAGATAAGATCATCACAGTCACCCGCTACCTCCCAAAGTATCCATATGAATCAACACAGATTCAGTACAGCTACAATCTGTGCCCTCCACATGCAGATGCCCACTTCATGCCATTCTGGGTAGAGTTCAGCCACGAGCGGCTGGAGGAGTACAAGTGGAACTATTTAGACCAGTACATCTGCTCTGCCGGATCAGAGGACTTCAGTCTCATTGACTCTCTGAAGTTTTGGCGGACGCGCTTCTTGCTTCTGCCAGCGGGGGGAGCCAGGCGAGTAGCGGATGGTGAGGGTCACTGGGATGTTTATGGAGAGGGAGCCGGGGCAGGACGAGATGGCCTCGCTGGCACAGGGGACTGGACCCTTTTAGATGGATTCATCCGTTTTTTGGAAGGCCTGAACAGGATTCGACGGCGTCATCGGTCTGACCGAATGATCCGCAAAGGAGCTACCATTAAAGGCCTGCAGGTGACAGGAGCCCTTACATCCTACACCCCAGAGCCGATAGCGCCCCCTCTTGGAAAAAAGGGCACCTCTGCTCTCTCTGCACTCTTGGAACTGGAGCAGACACAGAAGACTTTTGAAGAGCAGCAGCTTGCCGCTCAGCATGGTGGGAAACCATGTGGACCTTTCAGTGAAGCTGCCAACGTTGCCTTGACAACCACGTTTGTCGATAGCCCTCGTAAGCTTCCAGCTGAACAGGTTCCAGCAAATCCCATTGAGGGTGGGTTGTCGGACAAAATAAGCAACCAACCAGGTGAGAGAACATCTGCTGCATCTCAGGCCACAGGAGACCCAACCCCAGGCGCTAGTCTAGAGACTGGGGGGCAGTCGGGGTCCAGTGGACTGAGTCTTTCCTCATCTTCCACACTAATGGAGATCCTGGAAGCCATTAAGCATCCCACCACTGGAGTGCAGCTTTTGCCAGAGCAGAGGGGCTTGCCTCCCAACTGCTTCGTCAGTGCTGAGGTTGTGCATTGGCTGGTCAGCACTGTGGAGAATGTTGCCACGCAGGGCATTGCAGTAGAGATTATGCAGAAAATGCTGGAGGAAGGTCTGATTACTCATGCTTCTGGTGATGCCATGCGAACCTTTGTCTATGGCTTCTACTTCTACCGGATTGTCGATAAAGATAACGAGAAGGCCCCGCTGACTCAGCTTCCCCCAGCTGGAGCGAATGTATGGTCAGCTGCAGCTTTGGAAGACTTCGCTCTTTTCCAGAGGAAGTGGTTCGAGGTGGCCTTTGTTATGGAGGAACGTCGACCATGTGACTTACCTGCCTTTCTGCTGCCTTGGTTGCCCAGCCGGCCAGCCTCGTATGCAAGTAGGCATAGCTCCTTCAGCCGCAGCTTCGGAGGACGCAGCCAAGCTGCTGCACTGCTAGCCGCCACAGTTCCAGAGCAGAAAACAGTCACCTTGGATGTCGATGTGAACAATCGTAGTGATCGGACAGAATGGTGCAGCTGCTATTACCATGGCAACTTCTCCCTTAATGCTGCCTTTGAAATCAAGCTGCACTGGATGGCCGTCACTGCAGCCGTGCTCTTTGAAATGGTGCAAGGCTGGCACAGGAAGGCAGCATCTTGCGGATTCCTGCTTGTCCCTGTGTTGGAGGTGCCCTTTGCTTTGTCGTCATACCTATATGGCGACCCACTCCGTGCTCAGTTGTTTATTCCCCTAAATATCCAGTGCCTGCTAAAGGAGGGCTCTGATAACCTTTTTGAGGGTTTTGAGCCAGAGACATACTGGGACAGAATGCAATTGTTTCAGGAGGCCATACTGACTAGATTTGGCTTTGTTCAAGACAAGTTCTCAGCGTCAGCTTTTAACTTTCCATCAGAGAACAAACCTCAGTACATCCATGTAACAGGTACAGTATTTCTTCAGCTGCCTTACTCTAAAAGGAAGTACAGTAGTGGACAGAGGCGACGCCGTAACTCCACCACCTCCACCAATCAGAGCCTGTTTGGTTCTGAGGAGCGAGTGGGCTACAACTGGGCCTACAACACCATGCTAACCAAAGCCTGGAGGACTGGTGTGTTAGGAGATGAGAAACTGGCCGACCGCCTGCTTCGAGATTTCACAGACTTTTGTGCCAACAAGGATAATCGTCTGGTGACCTTCTGGGAAAGCTGTGTGGAGAAAATGAACGCGAGTGCCCCTTGAGAAAAGAGACAGGAGGAGAGGCGGTTTACAATGTGTCAGAGAAAGCTGAGAGTTTGCTTCTGCTGTAAGAGCTAACCTTAATGTACTGCTGCTATCATCTGATCATAGAGAAATAAAACACAGCCTCATCGTCAAACA
>TCONS_00004983
ATGACGGTCACCATGAAGGCAAACAAGTCCTACAAGCTTGTGGTGCACAAGAAGGGCTTTGGAGGCAGTGATGATGAGCTGATGATGAACCCTAAAGTATTTCCTCAAGTTAAACTGGGGGATATTGTCGAAATTGCACATCCAAATGATGAGTACAGtcCTCTGTTGCTACAGGTGAAGAGTTTGAAAGAGGACCTGCAGAAAGAAACTATCAGTGTCGATCAGACTGTGGCTCAGGCTTTCAAGCTGCGTGCCTACCAAGACGTCATCATCAATATTGTGGATCCAAAGGAGGTGACTTTGGATCTGGTGGAGCTCACCTTTAAAGATCAGTATATTGGGCGAGGAGACATGTGGCGACTAAAGAAGAGCTTAGTGAGCACATGTGCATATGTGACACAGAAAGTAGAGTTTGCAGGAATCAGGGCCCAGGCCAGTGAATTGTGGGTAAAAGGAGAAAAGGTCACTTGTGGCTACATTAGTGAGGATACACGGGTGGTCTTTCGCTCCACCTCTGCGATGGTTTATATATTCATCCAGATGAGCTGTGAGATGTGGGACTTCGATATCTACGGTGATCTTTATTTTGAGAAGGCTGTCAATGGTTTCCTTTCAGATCTGTTTGCCAAATGGAAAGAGAAGAACTGCAGTCATGAGGTGACAGTGGTGCTGTTCTCTCGCACCTTCTATTCTGCCAAAACACTGGAGGAGTTTCCAGAGAGCCAAAGAGCATCAGTTCGACAAGACCATGAAGGCCGCTATTATGAGGATTTCTACAGGGTGGTGGCCCAGAATGAAAGGCGTGATGAGTGGATGTCTCTCCTTGTTACCATTAAGAAGCTCTTTATACAGTATCCTGTACTGGTGCGGCTTAAAGGAGCAGATGGATTTCCATGTGGACACAACTCCACTTCTGCTCAAGGAAATTACCTGGAAGCAATCAACTTGTCTTTCAAtgTGTTTGATAAGCACTACATCAACCGTAACTTTGACCGCACTGGTCAAATGTCAGTGGTCATAACTCCAGGAGTGGGTGTTTTTGAAGTCGACCGATTGCTCATGATCCTCACCAAACAGCGCATGATTGACAACGGCATTGGTGTTGATCTGGTGTGTATGGGAGAACAGCCCCTTCACGCTGTTCCACTCTTCAAGTTGCATAACCGCACAGTACATGGAGACTCCAGAATTGGTGATGATTACAACCTGCCTCACTGGATCAACCACAGCTTTTACACATCAAAGAGTCAAAACTCTTGCAGCTGTTTTACACCTCGGATCAAGCTGGCTGGAAAGAAGGTTCATGCTGAGAAAGCCAAAAACAGCAAAGAACATTctcTTGGCGCTCCCAAAGATGCTGAGAACAGCCTTCCCATCCAGGTGGATTATGATGCGTATGATTCTCAGGTCTTCAGGCTTCCTGGGCCCTCCAGAGCTCAGAGGTCCACCAACTTTAGGTCAAGTCGGGAGCGGGAGTCAGTCAGCAGGAAGAGCTGGGGCTCTGCAGACGTGGGCAGCTCTCCTCCAAACCGCCATACAGGACCAGATGAACAGAGGAGCCTGGCGTCAGATGACAGTTTGGGCCACATGTCCAACATCCTGCTCATCCCACGTCCAGCTCAGGGCCAATACGAGGTCAGCAGCTCTCTGGGCTACACCAGCTGCACAAGAGAATTGTTGGAAAAAATGGTAGAATCTCAAAGGGACTCCAGTGCTCCGGGACGCTTTACCGTAGGAAGTGCTGAGTCCACTCTACATGTGCGGCCGGGTGGTTATACACCCCAGAGGGCCCTCATCAACCCGTTCGCTCCCTCACGCATGCCTATGAAACTCACATCCAATCGCCGCCGCTGGATGCACACGTTTCCCGTGGGTCCTTCAGGAGAGCCGATTCAGATCCACCATCAGACGCGTCAGAACATGGCTGAGCTGCAGGGCAGTGAGCAGAGAGACCCGGCTCGTACCTCTGCTGAGCTGCTGGAACTGGCCTATCATGAAGCCACAGGAAGTAAGCGGACAGCGTCCCGTCATGCTGGAGAGAATGGACTGTACATCAGTGGAGTTCCGGACAACATctctggaagcccagctagtagctCCAGCACTGGAACACCAGTGAACCGTGGTTCCTTCGAGGATTATTCCGGCAGTCTAGATCCGATCCTCCTGCTGTCTGCCCCTCCGACAGTGCCTAGTTTCTGCTGCACAGTCGGGGTGGACTGGAAGTCCCTCACCACTCCTGCCTGCCTCCCCCTTACCACCGATTACTTTCCCGACCGGCAAACCCTGCAGAATGACTATACAGAGGGATGCTACGACCTGCTGCCACACACTGACCTCGAGAGACGTGATGACGAGACTCCAGTGATGACGGCCCATCAGGTGTTTGAAGAGTTCATCTGTCAGCGACTGATGCAAGGCTACCAGATCATTGTACAGCCCAACAGGAAGCCACAGCCTGCTATAGCCCCGCCCCTCAGCAGCAGTCCCCTGTATTCCAGAGGGCTGGTGTCTCGCCGTAAACCAGAAGAAGAAGAGAGTCTTTACTGGCTCAGTATGGGCAGAACTTTTCATAAAGTCTGTCTTAAAGATAAGATCATCACAGTCACCCGCTACCTCCCAAAGTATCCATATGAATCAACACAGATTCAGTACAGCTACAATCTGTGCCCTCCACATGCAGATGCCCACTTCATGCCATTCTGGGTAGAGTTCAGCCACGAGCGGCTGGAGGAGTACAAGTGGAACTATTTAGACCAGTACATCTGCTCTGCCGGATCAGAGGACTTCAGTCTCATTGACTCTCTGAAGTTTTGGCGGACGCGCTTCTTGCTTCTGCCAGCGGGGGGAGCCAGGCGAGTAGCGGATGGTGAGGGTCACTGGGATGTTTATGGAGAGGGAGCCGGGGCAGGACGAGATGGCCTCGCTGGCACAGGGGACTGGACCCTTTTAGATGGATTCATCCGTTTTTTGGAAGGCCTGAACAGGATTCGACGGCGTCATCGGTCTGACCGAATGATCCGCAAAGGAGCTACCATTAAAGGCCTGCAGGTGACAGGAGCCCTTACATCCTACACCCCAGAGCCGATAGCGCCCCCTCTTGGAAAAAAGGGCACCTCTGCTCTCTCTGCACTCTTGGAACTGGAGCAGACACAGAAGACTTTTGAAGAGCAGCAGCTTGCCGCTCAGCATGGTGGGAAACCATGTGGACCTTTCAGTGAAGCTGCCAACGTTGCCTTGACAACCACGTTTGTCGATAGCCCTCGTAAGGATGCAGCCTTCATTTTGGACTTTATTCGTAGTCCACGTTCCTCCTACATCTGTCACTCTCAGCTTCCAGCTGAACAGGTTCCAGCAAATCCCATTGAGGGTGGGTTGTCGGACAAAATAAGCAACCAACCAGGTGAGAGAACATCTGCTGCATCTCAGGCCACAGGAGACCCAACCCCAGGCGCTAGTCTAGAGACTGGGGGGCAGTCGGGGTCCAGTGGACTGAGTCTTTCCTCATCTTCCACACTAATGGAGATCCTGGAAGCCATTAAGCATCCCACCACTGGAGTGCAGCTTTTGCCAGAGCAGAGGGGCTTGCCTCCCAACTGCTTCGTCAGTGCTGAGGTTGTGCATTGGCTGGTCAGCACTGTGGAGAATGTTGCCACGCAGGGCATTGCAGTAGAGATTATGCAGAAAATGCTGGAGGAAGGTCTGATTACTCATGCTTCTGGTGATGCCATGCGAACCTTTGTCTATGGCTTCTACTTCTACCGGATTGTCGATAAAGATAACGAGAAGGCCCCGCTGACTCAGCTTCCCCCAGCTGGAGCGAATGTATGGTCAGCTGCAGCTTTGGAAGACTTCGCTCTTTTCCAGAGGAAGTGGTTCGAGGTGGCCTTTGTTATGGAGGAACGTCGACCATGTGACTTACCTGCCTTTCTGCTGCCTTGGTTGCCCAGCCGGCCAGCCTCGTATGCAAGTAGGCATAGCTCCTTCAGCCGCAGCTTCGGAGGACGCAGCCAAGCTGCTGCACTGCTAGCCGCCACAGTTCCAGAGCAGAAAACAGTCACCTTGGATGTCGATGTGAACAATCGTAGTGATCGGACAGAATGGTGCAGCTGCTATTACCATGGCAACTTCTCCCTTAATGCTGCCTTTGAAATCAAGCTGCACTGGATGGCCGTCACTGCAGCCGTGCTCTTTGAAATGGTGCAAGGCTGGCACAGGAAGGCAGCATCTTGCGGATTCCTGCTTGTCCCTGTGTTGGAGGTGCCCTTTGCTTTGTCGTCATACCTATATGGCGACCCACTCCGTGCTCAGTTGTTTATTCCCCTAAATATCCAGTGCCTGCTAAAGGAGGGCTCTGATAACCTTTTTGAGGGTTTTGAGCCAGAGACATACTGGGACAGAATGCAATTGTTTCAGGAGGCCATACTGACTAGATTTGGCTTTGTTCAAGACAAGTTCTCAGCGTCAGCTTTTAACTTTCCATCAGAGAACAAACCTCAGTACATCCATGTAACAGGTACAGTATTTCTTCAGCTGCCTTACTCTAAAAGGAAGTACAGTAGTGGACAGAGGCGACGCCGTAACTCCACCACCTCCACCAATCAGAGCCTGTTTGGTTCTGAGGAGCGAGTGGGCTACAACTGGGCCTACAACACCATGCTAACCAAAGCCTGGAGGACTGGTGTGTTAGGAGATGAGAAACTGGCCGACCGCCTGCTTCGAGATTTCACAGACTTTTGTGCCAACAAGGATAATCGTCTGGTGACCTTCTGGGAAAGCTGTGTGGAGAAAATGAACGCGAGTGCCCCTTGA
>TCONS_00004984
AACCTTTGTCTATGGCTTCTACTTCTACCGGATTGTCGATAAAGATAACGAGAAGGCCCCGCTGACTCAGCTTCCCCCAGCTGGAGCGAATGTATGGTCAGCTGCAGCTTTGGAAGACTTCGCTCTTTTCCAGAGGAAGTGGTTCGAGGTGGCCTTTGTTATGGAGGAACGTCGACCATGTGACTTACCTGCCTTTCTGCTGCCTTGGTTGCCCAGCCGGCCAGCCTCGTATGCAACCGCCACAGTTCCAGAGCAGAAAACAGTCACCTTGGATGTCGATGTGAACAATCGTAGTGATCGGACAGAATGGTGCAGCTGCTATTACCATGGCAACTTCTCCCTTAATGCTGCCTTTGAAATCAAGCTGCACTGGATGGCCGTCACTGCAGCCGTGCTCTTTGAAATGGTGCAAGGCTGGCACAGGAAGGCAGCATCTTGCGGATTCCTGCTTGTCCCTGTGTTGGAGGTGCCCTTTGCTTTGTCGTCATACCTATATGGCGACCCACTCCGTGCTCAGTTGTTTATTCCCCTAAATATCCAGTGCCTGCTAAAGGAGGGCTCTGATAACCTTTTTGAGGGTTTTGAGCCAGAGACATACTGGGACAGAATGCAATTGTTTCAGGAGGCCATACTGACTAGATTTGGCTTTGTTCAAGACAAGTTCTCAGCGTCAGCTTTTAACTTTCCATCAGAGAACAAACCTCAGTACATCCATGTAACAGGTACAGTATTTCTTCAGCTGCCTTACTCTAAAAGGAAGTACAGTAGTGGACAGAGGCGACGCCGTAACTCCACC
>TCONS_00004985
GAAATCATCATGTCAACTCCTTCTCAGTATTTAATGTTTCAGATGTCATGAACTAAGCCATAAATGCTTTTATCACAATTACTCTCCATTGACCCATTTACGGTCGTAATGACTCCATGCCTGGCCTGTCATTTCATCCTCTTGGCCATTTCTGCTCTCTCTGTCTTTTTCGCTGTGTTTTCACCCCTCCCCTCTCAGCCGCCACAGTTCCAGAGCAGAAAACAGTCACCTTGGATGTCGATGTGAACAATCGTAGTGATCGGACAGAATGGTGCAGCTGCTATTACCATGGCAACTTCTCCCTTAATGCTGCCTTTGAAATCAAGCTGCACTGGATGGCCGTCACTGCAGCCGTGCTCTTTGAAATGGTGCAAGGCTGGCACAGGAAGGCAGCATCTTGCGGATTCCTGCTTGTCCCTGTGTTGGAGGTGCCCTTTGCTTTGTCGTCATACCTATATGGCGACCCACTCCGTGCTCAGTTGTTTATTCCCCTAAATATCCAGTGCCTGCTAAAGGAGGGCTCTGATAACCTTTTTGAGGGTTTTGAGCCAGAGACATACTGGGACAGAATGCAATTGTTT
>TCONS_00004986
CAGGAATCAGGAGCAATAGCACTTTGCACATCCAACATTGCATCTGACATATTCCCATGGGGTTTTCCAGCTTCCAGCTGAACAGGTTCCAGCAAATCCCATTGAGGGTGGGTTGTCGGACAAAATAAGCAACCAACCAGGTGAGAGAACATCTGCTGCATCTCAGGCCACAGGAGACCCAACCCCAGGCGCTAGTCTAGAGACTGGGGGGCAGTCGGGGTCCAGTGGACTGAGTCTTTCCTCATCTTCCACACTAATGGAGATCCTGGAAGCCATTAAGCATCCCACCACTGGAGTGCAGCTTTTGCCAGAGCAGAGGGGCTTGCCTCCCAACTGCTTCGTCAGTGCTGAGGTTGTGCATTGGCTGGTCAGCACTGTGGAGAATGTTGCCACGCAGGGCATTGCAGTAGAGATTATGCAGAAAATGCTGGAGGAAGGTCTGATTACTCATGCTTCTGGTGATGCCATGCGAACCTTTGTCTATGGCTTCTACTTCTACCGGATTGTCGATAAAG
>TCONS_00004987
ATGGATTCATCCGTTTTTTGGAAGGCCTGAACAGGATTCGACGGCGTCATCGGTCTGACCGAATGATCCGCAAAGGAGCTACCATTAAAGGCCTGCAGGTGACAGGAGCCCTTACATCCTACACCCCAGAGCCGATAGCGCCCCCTCTTGGAAAAAAGGGCACCTCTGCTCTCTCTGCACTCTTGGAACTGGAGCAGACACAGAAGACTTTTGAAGAGCAGCAGCTTGCCGCTCAGCATGGTGGGAAACCATGTGGACCTTTCAGTGAAGCTGCCAACGTTGCCTTGACAACCACGTTTGTCGATAGCCCTCGTAAGGATGCAGCCTTCATTTTGGACTTTATTCGTAGTCCACGTTCCTCCTACATCTGTCACTCTCAGCTTCCAGCTGAACAGGTTCCAGCAAATCCCATTGAGGGTGGGTTGTCGGACAAAATAAGCAACCAA

Function

symbol description
depdc5 Predicted to contribute to GTPase activator activity. Acts upstream of or within regulation of neuronal action potential and swimming behavior. Predicted to be part of GATOR1 complex. Predicted to be active in lysosomal membrane. Is expressed in central nervous system and notochord. Used to study focal epilepsy. Human ortholog(s) of this gene implicated in focal epilepsy. Orthologous to human DEPDC5 (DEP domain containing 5, GATOR1 subcomplex subunit).

GO:

id name namespace
GO:0034198 cellular response to amino acid starvation biological_process
GO:0035556 intracellular signal transduction biological_process
GO:0098908 regulation of neuronal action potential biological_process
GO:0010506 regulation of autophagy biological_process
GO:0032007 negative regulation of TOR signaling biological_process
GO:0036269 swimming behavior biological_process
GO:0005765 lysosomal membrane cellular_component
GO:1990130 GATOR1 complex cellular_component
GO:0005096 GTPase activator activity molecular_function

KEGG:

id description
ko04150 mTOR signaling pathway
ko04131 Membrane trafficking

ZFIN:

id description
ZDB-GENE-091204-356 Predicted to contribute to GTPase activator activity. Acts upstream of or within regulation of neuronal action potential and swimming behavior. Predicted to be part of GATOR1 complex. Predicted to be active in lysosomal membrane. Is expressed in central nervous system and notochord. Used to study focal epilepsy. Human ortholog(s) of this gene implicated in focal epilepsy. Orthologous to human DEPDC5 (DEP domain containing 5, GATOR1 subcomplex subunit).

Ensembl:

ensembl_id ENSDARG00000078105

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00004982 False 5203 mRNA 0.50 41 17171604 17222083
TCONS_00004983 False 4812 mRNA 0.51 42 17171742 17221725
TCONS_00004984 False 796 mRNA 0.50 7 17171964 17179415
TCONS_00004985 False 581 lncRNA 0.47 3 17172959 17174810
TCONS_00004986 False 515 lncRNA 0.52 4 17179372 17180147
TCONS_00004987 True 446 mRNA 0.52 5 17180012 17185814

Neighbor

gene id symbol gene type direction distance location
XLOC_002680 ywhah coding downstream 1518 17166035 ~ 17170086 (-)
XLOC_002679 slc5a1 coding downstream 11843 17135631 ~ 17159761 (-)
XLOC_002678 BX324123.4 coding downstream 38694 17104298 ~ 17132910 (-)
XLOC_002677 RNF208 coding downstream 67953 17102902 ~ 17103651 (-)
XLOC_002676 NA coding downstream 82693 17085524 ~ 17088911 (-)
XLOC_002682 rab36 coding upstream 1598 17223681 ~ 17232372 (-)
XLOC_002683 GNAZ coding upstream 32419 17254502 ~ 17284055 (-)
XLOC_002684 FP091248.1 coding upstream 120282 17342365 ~ 17342481 (-)
XLOC_002685 NA coding upstream 215407 17437490 ~ 17442421 (-)
XLOC_002686 nt5c2l1 coding upstream 238275 17460358 ~ 17484764 (-)
XLOC_002674 NA non-coding downstream 144493 17016799 ~ 17027111 (-)
XLOC_002673 NA non-coding downstream 160706 17006225 ~ 17010898 (-)
XLOC_002666 NA non-coding downstream 1447500 15716739 ~ 15724104 (-)
XLOC_002688 NA non-coding upstream 287897 17509980 ~ 17519034 (-)
XLOC_002689 BX927385.3 non-coding upstream 311527 17533610 ~ 17543022 (-)
XLOC_002692 BX927385.1 non-coding upstream 405045 17627128 ~ 17627253 (-)

Expression


Co-expression Network