G763693


Basic Information

Item Value
gene id G763693
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 2404890 ~ 2422385 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU868756
tctcccctttccatagtggggtcatattagtttgtaactgagagtctcccctttccatagtggggtgaTATTAGTATGTAGCTGAGTcgcccctttccatagtggggtcatattagtttgtaactgagagtctcccctttccatagtggggtcatattagtatgTAGCTGACAGTCttccctttccatagtggggtctttgtagtttgtagctgagagtctcctctttccatagtggggtcatattagtttgtagctgagtctcCtttccatagtggggtcatattagtttgaatctgagagtctcccctttccatagtggggtcatattagtttgtagctgagagtctcctctttccatagtggggtcatattagtttgtagctgagtctcccctttccatagtggggtcatattagtttgtagttcagactctcctctttccatagtggggtcatattagtttgtagctgagtctcctttccatagtggggtcatattagtttgtagctgagagtctcccctttccgtaatggggtcatattagtttgtagctgagagtctcctctttccatagtggggtcatattagtatgTAGCTGAGTCCTGTAT
>TU868757
tctcccctttccatagtggggtcatattagtttgtaactgagagtctcccctttccatagtggggtgaTATTAGTATGTAGCTGAGTcgcccctttccatagtggggtcatattagtttgtaactgagagtctcccctttccatagtggggtcatattagtatgTAGCTGACAGTCttccctttccatagtggggtctttgtagtttgtagctgagagtctcctctttccatagtggggtcatattagtttgtagctgagtctcCtttccatagtggggtcatattagtttgaatctgagagtctcccctttccatagtggggtcatattagtttgtagctgagagtctcctctttccatagtggggtcatattagtttgtagctgagtctcccctttccatagtggggtcatattagtttgtagttcagactctcctctttccatagtggggtcatattagtttgtagctgagtctcccctttccatagtggggttatattagtttgtatctgagagtctcctctttccatagtggggtcatattagtttgtagctgagagtctc
>TU868755
tctcccctttccatagtggggtcatattagtttgtaactgagagtctcccctttccatagtggggtgaTATTAGTATGTAGCTGAGTcgcccctttccatagtggggtcatattagtttgtaactgagagtctcccctttccatagtggggtcatattagtttgtaactgagagtctccccttttcatagtggggtcatattagattg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU868756 False 610 lncRNA 0.44 4 2404890 2422385
TU868757 False 566 lncRNA 0.44 3 2415095 2422385
TU868755 True 208 lncRNA 0.44 2 2421136 2422385

Neighbor

gene id symbol gene type direction distance location
mog NA coding downstream 35413 2357311 ~ 2369477 (-)
LOC110535267 NA coding downstream 50577 2212274 ~ 2354313 (-)
LOC118966148 NA coding downstream 242281 2161247 ~ 2162609 (-)
LOC118965955 NA coding downstream 246209 2157982 ~ 2158681 (-)
LOC118965963 NA coding downstream 320476 1947567 ~ 2084414 (-)
LOC110519362 NA coding upstream 190082 2612467 ~ 2680635 (-)
LOC110518027 LOC106599962 coding upstream 305080 2727465 ~ 2788437 (-)
LOC110531328 LOC106578170 coding upstream 391010 2813395 ~ 2824097 (-)
LOC110531335 LOC106593060 coding upstream 436374 2858759 ~ 2861355 (-)
LOC110531336 LOC106593060 coding upstream 448382 2870767 ~ 2875089 (-)
G763684 NA non-coding downstream 25785 2373656 ~ 2379105 (-)
G763666 NA non-coding downstream 178801 2223685 ~ 2226089 (-)
G763658 NA non-coding downstream 240385 2163831 ~ 2164505 (-)
G763655 NA non-coding downstream 260540 2143408 ~ 2144350 (-)
G763708 NA non-coding upstream 24117 2446502 ~ 2446799 (-)
G763711 NA non-coding upstream 30379 2452764 ~ 2494246 (-)
G763712 NA non-coding upstream 31127 2453512 ~ 2454143 (-)
G763726 NA non-coding upstream 72861 2495246 ~ 2495527 (-)
G763727 NA non-coding upstream 74203 2496588 ~ 2496886 (-)
G763587 NA other downstream 426659 1962973 ~ 1978231 (-)
G762459 NA other downstream 1538458 861374 ~ 866432 (-)
G762118 NA other downstream 1968390 429600 ~ 436500 (-)
G762116 NA other downstream 2106371 293672 ~ 298519 (-)
G762179 NA other downstream 2112605 290345 ~ 292285 (-)
G763719 NA other upstream 50713 2473098 ~ 2486901 (-)
G763961 NA other upstream 873917 3286243 ~ 3299103 (-)
LOC110498423 LOC105006500 other upstream 1429586 3851852 ~ 3901549 (-)
LOC118966151 LOC106587785 other upstream 1591449 4012152 ~ 4033537 (-)
G765059 NA other upstream 1868410 4270732 ~ 4319826 (-)

Expression


Co-expression Network