XLOC_026814


Basic Information

Item Value
gene id XLOC_026814
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 54873401 ~ 54884180 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00053145
AccagatgCTGTAAAGTACAACCAAACCAGTCAAATATTCACAAAGCCTTCACGCTAAAACGAATCAATAACATCTGAACCGACACGTGAAAAAGTCTTCCATCACAcattgaaatattttgaaaattatgTTACGATATTTATAAGCAAACAAAGAGGTAAATAGAGTCCaccatggcttttttttttagtccTTAAAGTTTTACAGAACAGAAACAAGCAAGCACGTTTAAAGCACTGTTATAGACCACACAATATTTGGTCATTAAACTGACAAAAGTCCACCAGTATATTTAATcactataaatattacatttgaatCCTCATATATAATGATCTTGTATGTACTGTATAAGTGCTTTTCTGGTCTTTAGTCAGCACACACAAACAAGTTCAGGACATTTAAAAGCATTTCAAAGGAACAGTTAAAgatatacatttctgtagtttTTCACTAATTAGTTGAACACATGATCGTTTATAGAGTTGTACAGATATCCTGAAATGAGTaggttatttattcattatttaaatgtgcttTGTATATTAACCTTAACAGGCTTGGTTAGTGTTACATTTCTGGATAGAAGCTCTGTAATAGCATTGTATGACCAAGCACTGATATGGTGTTCTTAATCTTCGGCTAcgctcttaaaaataaagcttatttTCATTCTGGTTCAAAAATTCTTAAAACAAcactccacattttttttttttttggaaatgggcTCATTTTATAGCAGttgaattttcacattttttatccAGTCATTTAATCTTAGagtttggcaggagcacttttagcgtaACAATTCTTTTTCAGCGTGatgtgctaatggtctaatccgatttaatgatttatgctaagctaaaagtgctcctgccagacctggaCATTGactgaatgtattaaaaaatggtaaaactccacTGTTTAACTTAGATGAGTCATAAAATGATcctctttaaaatatataataataatcaataatacgACTGTTCGTGGAATGGAAAGAATCGGCGGATGTTTAACATTCTTTAAACCACCGATGTA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00053145 True 1057 lncRNA 0.32 2 54873401 54884180

Neighbor

gene id symbol gene type direction distance location
XLOC_026813 ubald1b coding downstream 26957 54833658 ~ 54846444 (-)
XLOC_026812 NA coding downstream 52501 54791553 ~ 54820900 (-)
XLOC_026811 NA coding downstream 89080 54748396 ~ 54784321 (-)
XLOC_026810 s1pr2 coding downstream 204216 54616015 ~ 54669185 (-)
XLOC_026809 dnmt1 coding downstream 266235 54591218 ~ 54607166 (-)
XLOC_026815 rhbdf1a coding upstream 12151 54896331 ~ 54993027 (-)
XLOC_026816 nprl3 coding upstream 161166 55045346 ~ 55079742 (-)
XLOC_026817 hbba2 coding upstream 207050 55091230 ~ 55092051 (-)
XLOC_026818 hbba1 coding upstream 214277 55098457 ~ 55099272 (-)
XLOC_026819 hbba1 coding upstream 219265 55103445 ~ 55104310 (-)
XLOC_026805 NA non-coding downstream 1030617 53842532 ~ 53842784 (-)
XLOC_026804 BX004869.1 non-coding downstream 1183973 53689310 ~ 53689428 (-)
XLOC_026802 NA non-coding downstream 1284224 53573131 ~ 53589177 (-)
XLOC_026831 NA non-coding upstream 954274 55838454 ~ 55839514 (-)
XLOC_026834 CU855917.1 non-coding upstream 1526961 56411141 ~ 56413023 (-)
XLOC_026840 NA non-coding upstream 2152914 57037094 ~ 57037670 (-)
XLOC_026851 CT583687.2 non-coding upstream 3173434 58057614 ~ 58059819 (-)
XLOC_026854 NA non-coding upstream 3224251 58108431 ~ 58110154 (-)

Expression


Co-expression Network