G763800


Basic Information

Item Value
gene id G763800
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 2809239 ~ 2810641 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU868911
gtctctctgtaccagtgtatttatccctgtgtttcctgtctctctgtaccagtgtatttatccctgtgtttcctgtctctctgtgccagtgtgTTTTGTATGTTTAAGTCAAGTCAACCAGTCTGTTTTTCCCCCGTACTCCTGTTGcaattctcctttttctagtcctcccggttttgaaccttgcctgtttctggactctgtacccgcctgccttgacctttctgcctgcctgacctttctgcgtgcctgaccattctgcctgcctgaccattctgcctgcctgaccattctgcctgcctgaccattctgcctgcctgaccattctgcctgcctgaccattctgcctgccttgaccacgagcctgcct
>TU868909
ctgtctctctgtaccagtgtatttatccctgtgtttcctgtctctctgtaccagtgtatttatccctgtgtttcctgtctctctgtaccagtgtatttatccctgtgtttcctgtctctctgtaccagtgtatttatccctgtggttcctgtctctctgtgccagtgtatttttccctgtgtttcctgtctctctgtaccagttcgTTTTGTATGTTTAAGTCAAGTCAACCAGTCTGTTTTTCCCCCGTACTCCTGTTGcaattctcctttttctagtcctcccggttttgaaccttgcctgtttctggactctgtacccgcctgccttgacctttctgcctgcctgacctttctgcgtgcctgaccattctgcctgcctgaccattctgcctgccttgaccacgagcttgcctgaccattctgcctgcctgaccattctgcctgcctgaccagtctgcctgcctgaccagtctgcctgcctgaccattctgcctgcctgaccattctgcctgccttgaccacgagcctgcctgaccattctgcctgcct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU868911 False 370 lncRNA 0.52 3 2809239 2810641
TU868909 True 551 lncRNA 0.51 2 2809358 2809977

Neighbor

gene id symbol gene type direction distance location
LOC110518027 LOC106599962 coding downstream 20802 2727465 ~ 2788437 (-)
LOC110519362 NA coding downstream 128604 2612467 ~ 2680635 (-)
mog NA coding downstream 439762 2357311 ~ 2369477 (-)
LOC110535267 NA coding downstream 454926 2212274 ~ 2354313 (-)
LOC118966148 NA coding downstream 646630 2161247 ~ 2162609 (-)
LOC110531328 LOC106578170 coding upstream 2754 2813395 ~ 2824097 (-)
LOC110531335 LOC106593060 coding upstream 48118 2858759 ~ 2861355 (-)
LOC110531336 LOC106593060 coding upstream 60126 2870767 ~ 2875089 (-)
LOC110531340 LOC106578174 coding upstream 75931 2886572 ~ 2913710 (-)
LOC110531345 NA coding upstream 111787 2922428 ~ 2925281 (-)
G763320 LOC106578169 non-coding downstream 5378 2800621 ~ 2803861 (-)
G763748 NA non-coding downstream 105066 2550749 ~ 2704173 (-)
G763773 NA non-coding downstream 131227 2637437 ~ 2678012 (-)
G763751 NA non-coding downstream 218404 2548674 ~ 2590835 (-)
G763747 NA non-coding downstream 234742 2552840 ~ 2574497 (-)
G763815 NA non-coding upstream 18735 2829376 ~ 2829607 (-)
G763816 NA non-coding upstream 19511 2830152 ~ 2830510 (-)
G763817 NA non-coding upstream 25249 2835890 ~ 2836542 (-)
G763825 NA non-coding upstream 43344 2853985 ~ 2855412 (-)
G763833 NA non-coding upstream 55251 2865892 ~ 2866277 (-)
G763719 NA other downstream 322338 2473098 ~ 2486901 (-)
G763587 NA other downstream 831008 1962973 ~ 1978231 (-)
G762459 NA other downstream 1942807 861374 ~ 866432 (-)
G762118 NA other downstream 2372739 429600 ~ 436500 (-)
G762116 NA other downstream 2510720 293672 ~ 298519 (-)
G763961 NA other upstream 485661 3286243 ~ 3299103 (-)
LOC110498423 LOC105006500 other upstream 1041330 3851852 ~ 3901549 (-)
LOC118966151 LOC106587785 other upstream 1203193 4012152 ~ 4033537 (-)
G765059 NA other upstream 1480154 4270732 ~ 4319826 (-)
G765100 LOC106597704 other upstream 1635686 4446327 ~ 4536079 (-)

Expression


Co-expression Network