Gene
RNA
| Item | Value |
|---|---|
| gene id | XLOC_026823 |
| gene name | hbae3 |
| gene type | coding |
| species | zebrafish (Danio rerio) |
| category of species | model fish |
| Item | Value |
|---|---|
| chromosome id | NC_007114.7 |
| NCBI id | CM002887.2 |
| chromosome length | 62628489 |
| location | 55146418 ~ 55147788 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| symbol | description |
|---|---|
| hbae3 | Predicted to enable several functions, including heme binding activity; oxygen binding activity; and oxygen carrier activity. Predicted to contribute to haptoglobin binding activity and peroxidase activity. Predicted to be involved in hydrogen peroxide catabolic process. Predicted to act upstream of or within oxygen transport. Predicted to be part of haptoglobin-hemoglobin complex and hemoglobin complex. Is expressed in erythroid lineage cell; hematopoietic system; mesoderm; presumptive blood; and vasculature. |
| id | name | namespace |
|---|---|---|
| GO:0042744 | hydrogen peroxide catabolic process | biological_process |
| GO:0015671 | oxygen transport | biological_process |
| GO:0031838 | haptoglobin-hemoglobin complex | cellular_component |
| GO:0005833 | hemoglobin complex | cellular_component |
| GO:0019825 | oxygen binding | molecular_function |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0004601 | peroxidase activity | molecular_function |
| GO:0043177 | organic acid binding | molecular_function |
| GO:0005344 | oxygen carrier activity | molecular_function |
| GO:0031720 | haptoglobin binding | molecular_function |
| GO:0020037 | heme binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-990706-3 | Predicted to enable several functions, including heme binding activity; oxygen binding activity; and oxygen carrier activity. Predicted to contribute to haptoglobin binding activity and peroxidase activity. Predicted to be involved in hydrogen peroxide catabolic process. Predicted to act upstream of or within oxygen transport. Predicted to be part of haptoglobin-hemoglobin complex and hemoglobin complex. Is expressed in erythroid lineage cell; hematopoietic system; mesoderm; presumptive blood; and vasculature. |
| ensembl_id | ENSDARG00000079305 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TCONS_00052157 | False | 787 | mRNA | 0.45 | 3 | 55146418 | 55147788 |
| TCONS_00052158 | True | 485 | mRNA | 0.52 | 4 | 55146602 | 55147731 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| XLOC_026822 | hbae1.3 | coding | downstream | 7291 | 55138413 ~ 55139127 (-) |
| XLOC_026821 | hbae1.3 | coding | downstream | 18160 | 55127549 ~ 55128258 (-) |
| XLOC_026820 | hbae1.1 | coding | downstream | 25293 | 55120330 ~ 55121125 (-) |
| XLOC_026819 | hbba1 | coding | downstream | 42108 | 55103445 ~ 55104310 (-) |
| XLOC_026818 | hbba1 | coding | downstream | 47146 | 55098457 ~ 55099272 (-) |
| XLOC_026824 | kank2 | coding | upstream | 13839 | 55161627 ~ 55214130 (-) |
| XLOC_026825 | dock6 | coding | upstream | 70809 | 55218597 ~ 55328548 (-) |
| XLOC_026826 | mafga | coding | upstream | 254163 | 55401951 ~ 55404985 (-) |
| XLOC_026827 | ern1 | coding | upstream | 272388 | 55420176 ~ 55481157 (-) |
| XLOC_026828 | tex2 | coding | upstream | 339473 | 55487261 ~ 55537096 (-) |
| XLOC_026814 | NA | non-coding | downstream | 262238 | 54873401 ~ 54884180 (-) |
| XLOC_026812 | NA | non-coding | downstream | 325518 | 54791553 ~ 54820900 (-) |
| XLOC_026811 | NA | non-coding | downstream | 362097 | 54748396 ~ 54784321 (-) |
| XLOC_026805 | NA | non-coding | downstream | 1303634 | 53842532 ~ 53842784 (-) |
| XLOC_026804 | BX004869.1 | non-coding | downstream | 1456990 | 53689310 ~ 53689428 (-) |
| XLOC_026831 | NA | non-coding | upstream | 690666 | 55838454 ~ 55839514 (-) |
| XLOC_026834 | CU855917.1 | non-coding | upstream | 1263353 | 56411141 ~ 56413023 (-) |
| XLOC_026840 | NA | non-coding | upstream | 1889306 | 57037094 ~ 57037670 (-) |
| XLOC_026851 | CT583687.2 | non-coding | upstream | 2909826 | 58057614 ~ 58059819 (-) |
| XLOC_026854 | NA | non-coding | upstream | 2960643 | 58108431 ~ 58110154 (-) |
