XLOC_026825 (dock6)


Basic Information

Item Value
gene id XLOC_026825
gene name dock6
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 55218597 ~ 55328548 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00052161
ACGACTGACACAAGGAAGCTTATGACTCCACAATAATATTACCAAAGTACAGGGAAACTGTAAGGAGCTCTGCCTGTTTAGATGGGATGGCAACTTTAACCAGCGAACGGAGAGCGTTTGCGCACAAAATTAACAGGACGGTTGCGTCTGAGGTCAGAAAGCAAGTTTCCAGGGAATATGGCTCCCCACAGATGTCCAAAAAACGTGCTGGAGCTCATCAGCCGGTGCCTTTGACGGAGGTGGTGGAGCCGGTGGATTATGAGGAGTATGTGAGCAGTCATCCTCCTGGAGCAGAGCCTGGACCCCTCAGACAGCTGCTGGAGTTTCCCAGAGATGACCTTGAGCTGGTTCTGCAGGAGAGAGAGTGTGTCACCATAGAGCCACCTGTCCCAGAAGAGGATTCGCTGGACCCCAGAGTGAGGGATGCTTTGGGAGTCTACACTGATGACTGGCTTATCATCCAGAGGAAGTATCAGTGTTACAGCACTCTGCAGACACCTCATAACTCTGAGCGGCAGCGTGAGAAGCAGAAAGGACTCGTCAAACAGACGTTTGAGCTGGATGAGGCTGCTATTGAGCGCCAGGATGAGCAGGATGACCCAAAGAGGCACTCGGTGTCGCTGGATGACACTCCGCGGGGGAGCTGGGCTTCCAGTATATTTGACCTAAAAAACTCCATTCCGGATGCACTATTGCCTTCAGTGCTTGAGCGCACTGCTGCTGAGGAGATGGACAGACGCAACGCTGACAACCGCCAGCAGGGCCGCCACAACCATCTCCTGGGACTCTATCCTGCACCGGATGAGGACGAGGCCGTCGAGAGGTGTGCCATTCCAGAAGTGCCCAAGGAGCACAGCGGACAGAGGATCATGGTCAAGTGTTTGTCGCTCAAATTCGAGATTGAAATCGAGCCAATATTTGGATCACTGGCTCTGTATGATGTTAGAGAAAAGAAAAAGATCTCTGAGGATTTCCACTTTGACCTGAACTCAGATCAGATGAAGGGCTTGCTCCGACCACACAACCCCCATGTAGCCATCTCCACCCTGGCCCGATCCGCCATCTTCTCCATTACATACCCGTCTCCTGAAATCTTCCTGGTCATCAAGCTGGAGAAAGTCCTTCAGCAGGGAGATATTGGTGAATGCTGTGAGCCGTACATGGTCATGAAGGAGTCCGACTCCATTAAGCATAAAGAGAAGCTGGAGAAGTTGAGGGCTCAGGCCGAGCAGATGTGCTCCAGGCTGGGTGGATTTCGCATGCCCTTTGCCTGGACTGCAATTCATTTACTGAACATTGTCAGCAGCGTTGGAGGCCTGGACCGCTCCGATTCAGACTCAGACACGGAGCGAAAGGGGACGTGGAATGAGAGGAAGAAGAAGGGATTTGAAAGGATGAGTGTAGGAGAGGACATGTGCAACTTCACGAACTTCCGTCCGGCCACTCTCACAGTCACCaacttttttaaacagGAAGGGGACAGACTGAGTGATGAAGACTTATATAAGTTTCTGGCAGACATGAGGAGGCCGTCATCAGTGCTGCGTCGACTCAGGCCTGTGACAGctcagCTAAAGATAGACATCTCTCCGGCTCCTGAGGCCCCACACTACTGTCTGTCTCCAGAGCTGCTTCATGTCAAGCCTTACCCCGATCCCCGTGTGCGTCCCACTAAAGAAGTGCTGGAGTTTCCCGCTCGCTACGTCTACACCCCTCACACTACATACAGGAACTTGCTGTACGTTTACCCTCAGTCCGTGAACTTCAGCAGCCGGCAGGGTTCGGTGAGGAACATTGCTGTGAAGGTGCAGTTCATGGCAGGAGAGGATCCCAGTCAGGCCATGCCGGTCATTTTTGGAAAGTCAAGCTGTGCAGAGTTTTATAAGGAGGCGTACACTCCAGTCATCTACCATAACAAGTCCCCCGAGTTCTATGAGGAGGTGAAGATGAAGATCCCCGCCAACCTCACAGACAACCACCACCTGCTCTTCACCTTCTATCACATCAGCTGCCAGCCTAAGCAGAACACCCTTCTGGAGACGCCCGTGGGCTACACGTGGATCCCCCTCATGCAGCATGGCCGTCTGCGCTCCGGCTCCTTCAGTCTCCCTGTGTCTGTGGAGAAACCTCCACCCAGCTACTCTGTCCTCACTCCTGACgtccAGCTACCAGGGATGAAATGGGTGGACAATCATAAAGGGGTCTTTAATGTTGAGGTGAAGGCAGCCTCATCTGTTCACACACAGGATCCGCACCTGGACAAGTTCTTCACGCTGGTATATGTTCTGGAAGAGTACTCTTTCCCCTTTCGTCTGAAGGACGTGATCATCACAGAGTCCAACGTGGAGGCGGAGCTGAAGGCCAGCATGGCGGCTCTGAAGGGGGCGCTGCTGGACACCTGTGTTCGCTTTTTGCATCAGCTGATGAGCAAACTCATATTACTGATCGTACACCCACCTGTCATAGCAGGACAGATCGTAAATCTCGGCCGTGCTGCGTTTGAAGCCATGGCCCTGTTGGTAAACCAGATCCATAAGAATTTGGAAGGAAACCAGGACCATCACGGCCGCAACAATCTGCTGTCCTCCTACATCCACTACTGCTTCCATCTGCCCACAACAGAGCCTGTGTCTCCCCCTGCAGTGGGAGCTGCAGCATATGATCTGCCCATCCACTATGCCACGCTTTCTAGGGCCACATCAAGACCCAGTGCCCTGCTGCTGTCCCGCTCTAAGAGCATTAGTAACTCTAACCCTGACCTGGCCTCTACCCCCGCCACTCCTGATGAGGAGGTGCAGAGGATCATCGGCAGCAAGGGAATAGACCGCTCTCATTCCTGGGTAAACTCTGCTTACGCTCCAGGGGGCTCGAGGGCCGTGCTCCGCCGGAACCCCAACTCGAGCTGTGAGCTCAAGCAGGCCAGTGAGCGAGCCTGTAATCGCATGTCCGCCTACATCGAGACTACCTCCCTTCTCTGTCCTCCCTCCAGGCAGATCGCCAAGAAGCTGCTTCATGAAGAGTTGGCTCTGCAGTGGGTCGTGAGCACCAGCACCGTAAGGGAGGCGTCTCTGCAGCAGGCCTGGTTCTTCTTCCAGCTCATGGTGAAGAGCATGTCCCATCATCTGTTCCTGTCCTCACGCCTGGACATGCCCCGACGCCAGCGCTTTCCAGACCGCTTTGTGGATGACATTGCAGCCTTAGTGTGTGCCATCAGCGCAGACATAGCCAGCAGATATCACAAGgatgtGGAGCTTGTGGAGAGGTTAAACAGCAGTTTGGCCTTTTTCCTTAATGACCTGCTCTCTCTCATGGATAGAGGCTTTGTTTTCAACCTTGTTCGCTCTTATTATAAACAGATTAATAATAAGCTGCACACAGCGCAGAATCCCAGCTCTCTAACAGCGCTGAGGATGGACTTCATCCGGATCATCTGCAGTCACGAGCACTACGTCATCCTCAACCTACCCTGCGCCACTCTTAGTCCTCCAGCATCCCCTTCACCCTCCACATCTTCCACCACCTCACAGAGCTCTGCATTCTCCAGTCATGCTCAGGATCAAGGTGTGGTCAGCATGTTTGAGCTGTCAGTGCCATTTCGCCAGCAGCACTTTCTCTCAGGCCTGCTGTTAGCTGAACTGTCACTCATCCTGGAGCCGGATGGAGAGAGTGTGTTCTTTCTCCATAAGAAGGCCATCAGTGCGCTTCACTCTCTGCTATGCAGTCACGATGCAGACCCCAGATACACAGACCCTCAGGTTCGCTCGCACGTGGCCCAGCTCTACCTGCCCCTCATCCCCATCATCATGGAGACGCTGCCTAAGCTCCACGACTTCACCGACACGTCTCCACAGCGGGTGCGTCACGCCTCGGCGCTCGCCGATGATAACGACCCAGACAACGGCACCATTAGCCAGTCTGTTGCCATGGCAATCGCTGGCTCACCGCTGCCCCACTCCAAAGCCAATCCCTTCACTCTGCCATCAGTGGCTGGCCGCCAGTGTGGTGTCCTCTCAGCGGAGTGCAGCAGGACGCTGCTGGTGTGTTTTCTGTGGGTCTGGAAGAACGCTGATGCAGGGCTGCTGGAGCGATGGGTTTCAGACCTGTCTGTGCCACAGATCAACCGTCTGCTGGATCTGCTCCACCTCTGTCTGTCCTGTTTCGAATACAAGGGAAAGAAAGCTCTGGAGAGAATCAACAGCCTGACCTTTAAGAAGTCTCAGGACATGAAGGCCCGTCTTGAGGAGGCCATACTGGGCACTATTGGAGCAAGACAAGAGATGGTCCGCCGCTGCAGagAGCGCAGTCCATATGGAGGACAGGAAAATGTGCGCTGGAGGAAGAACGTCACTCACTGGAGGCAGAATGCAGACAGAGTGGACAAAACGAAGGCAGAGGTGGAGCAGGAGTCGGTGGTGGATGGAAACTTGGCGACTGAAGCGGCTCTCATAGCCCTCGACACACTGGAGATCATTGTCAAAACGGTGGTGATGTCCGAGCTGAAGGAGAGTGTTCTGGGTGGAGTGTTGAGGGTCCTCCTTCACAGTATGGCAGGAAACCAGAGCGCCCTCTTCCTGCAGCACTGCTTCAGTACACAGAGAGCTTTAGTCTACAAGTTTCCAGAGATGTTGTTTGAAGAGGACACTGAGCTCTGTGCAGATCTGTGTTTGCGGTTACTGCGTCACTGCAGCAGCAGCGTGAGCTCTGTCCGCAGCCATGCCAGCGCCTCGCTCTACCTTCTCATGAGACAGAACTTCGAGATCGGAAACAACTTTGCCCGTGTAAAGATGCAGGTCACCATGTCTCTGTCTTCACTCGTGGGAACCTCTCAAACGTTTAATGAAGAACATTTGCGACGCTCCTTGAAAACAATTCTTACGTATGCAGAGGATGACCTAGAGCTCAGAGATTCCCCCTTCCCTGAGCAGGTCCAGGATCTGGTCTTCAATCTCCACATGATCCTCACTGACACTGTGAAAATGAAGGAGCACCAACAGGACCCAGAGATGCTCATAGACCTCATGTACAGGATTGCTAAAGGCTATCAGAACTCTCCAGACCTGAGACTGACTTGGTTGCAGAACATGGCAGGGAAGCACTCAGAAAAAGGCAATCATGCAGAGGCAGCTCACTGTCTTGTGCACAGCGCCGCCCTGGTGGCCGAGTACCTCAACATGCTTGAAGACTGCCGCTACCTCCCTATCGGCTGTGTCTCCTTCCAGAGCATTTCATCGAATGTTCTGGAGGAGTCTGCGGTGTCTGATGACATCCTTTCCCCGGAGGAGGAGGGCATCTGTTCAGGAAAGTACTTCAGTGAGTCTGGCCTCGTGGGACTGCTGGAGCAGGCAGCTGCCTCTTTCAACATGGCTGCAATGTACGAGGCCATAAACGAGGTTTATAAGATCCTCTGTCCCATTCATGAGGCCAACAGAGACTTTAAGAAGCTGGCCTCGGTGCACGGCAAACTGCAGGACGCATTTAACAAAGTGTACAATCAGAGCTCAGGATGGGAGAGGATGTTTGGCACCTACTTTCGTGTGGGCTTCTATGGGTGCCGCTTTGGAGATCTGGATGAGCAGGAGTTCGTCTATAAAGAGCCATCTATTACTAAACTGGCCGAAATCTCACATAGACttgagGAGTTTTACTCTGAAAGATTTGGTGATGAAGTGGTGGCGATTATCAAAGACTCCAACCCTGTTGACAAGAACAAACTGGACCCCAATAAGGCCTATCTTCAGATCACTTACGTGGAGCCTTTCTTCGACACCTACGAGCTGAAGGAGCGCATCACATACTTTGACAAGAACTACAACCTACGCACCTTCATGTACTGCACGCCATTCACGCTGGATGGCCGGGCTCACGGAGACCTTCATGAGCAGTACAAGCGCAAAACCATCCTCACCACTTCACATGCTTTTCCCTACATCAAGACCCGCATCAACGTCATCCACAAAGAGGAGATTATCCTGATGCCAATGGAGGTGGCCATCGAGGACATGCAGAAGAAAACTCAAGAACTGGCCTTCGCCACCCATCAGGACCCTGCAGACCCAAAGATGCTTCAGATGGTGCTGCAGGGTTGTGTCGGCACCACTGTGAATCAGGGTCCACTGGAAGTGGCTCAGGTGTTCCTGTCTGAAATCCCAGAAGACCCCAAACTCTTCCGGCATCACAATAAACTGCGACTCTGCTTCAAGGACTTTACTAAAAGGTGTGAAGATGCTCTGAGGAAGAACAAGTCTCTGATCGGCCCGGATCAGAAAGAGTACCATCGAGAGCTAGAGAGGAACTACCTCAAGCTGAAAGAGGCTCTGTTTCCCCTCATCAACCGCAAGATCCCGCAACTCTACAGACCTCTGCCTCTGCCCACCCTGCCAACACAGAGGAATTCTCTCAGTCGCTCCAGTTTTCGGAGGCTGGAGTGTTGAGGTGTGGCCGATCTGGACGCAAAACCGCACATGATCTCCATCTCCATCATCAAACCAACACAAAAAAACCACACGTCACATTCCTGCGTCAGACACGAGCCCTCCTGAGCCTCCGTCTGTTTACACTCAGCTTTATCTGCTGTAAACACGCTCGTTATGAGCATCAGCAGACAAAACTGTAGCTTCTTGCTCAACACTGGAGGTAATTCTAGCATTTCACCGACACAGGGCGTTAAGATGCTCCTCCACACTtcctgcttttgtttgtttgtgctcgTCTGTCTTGTCTTGTGTGAGAAAGAGGGCAAACGAAGTCCGTCCAGACGTTCCTGTGAATGTTctgccacataaaaaaaaaacccttgcACTGCTGTTTGATTTATGACTGGATTAAAGCGTTTGTGTCTTTTTAAAGACAGATCGCTGAGCCTAGAGACTCAGGTTTAATCTTCCGTTTCATTTGTAGAAATTGTTTTTTAGAGCAGTTCTGCAGAGAAACACTGGGCTGATTTCACGAGTTTAGAGGATGAGTTAAAAGTTTGGTGTCAGTGTGATTTGTTTTGGGGCTTTTAAAAGAAGTC
>TCONS_00052162
ATATTACCAAAGTACAGGGAAACTGTAAGGAGCTCTGCCTGTTTAGATGGGATGGCAACTTTAACCAGCGAACGGAGAGCGTTTGCGCACAAAATTAACAGGACGGTTGCGTCTGAGGTCAGAAAGCAAGTTTCCAGGGAATATGGCTCCCCACAGATGTCCAAAAAACGTGCTGGAGCTCATCAGCCGGTGCCTTTGACGGAGGTGGTGGAGCCGGTGGATTATGAGGAGTATGTGAGCAGTCATCCTCCTGGAGCAGAGCCTGGACCCCTCAGACAGCTGCTGGAGTTTCCCAGAGATGACCTTGAGCTGGTTCTGCAGGAGAGAGAGTGTGTCACCATAGAGCCACCTGTCCCAGAAGAGGATTCGCTGGACCCCAGAGTGAGGGATGCTTTGGGAGTCTACACTGATGACTGGCTTATCATCCAGAGGAAGTGAGTATTCAGACTCCCAATGTGAAGCTGGAGTTCACCATTTCAAAGTTTGGACATGCCTACTTGTTTACTCAAAGACatgataaaagaaaagaaaattaacacacCTAAGATGGAAAAAATGCAATTATAATTGGTGAAGTCATTAGAATTATGACATAATACAAATCGAGATGCCAGCAGCTACCTCTCTGccactctcacatggtcacccactgaagctaagcagggctgcgcccggtcagtacctggatgggagaccacatgggaagctaggttgctgccggaagtcatgttagtgaggccagcaggagacGCCCAACCTGCCgtctgtgtgggttctaatgccccagtatagtgacggggactctatattgctcagtgagcgctgtctttcagatgagccgttaaaccaaggtccgactctctgtggtcg

Function

symbol description
dock6 Predicted to enable guanyl-nucleotide exchange factor activity. Predicted to act upstream of or within small GTPase mediated signal transduction. Human ortholog(s) of this gene implicated in Adams-Oliver syndrome. Orthologous to human DOCK6 (dedicator of cytokinesis 6).

GO:

id name namespace
GO:0007264 small GTPase mediated signal transduction biological_process
GO:0005085 guanyl-nucleotide exchange factor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-120411-11 Predicted to enable guanyl-nucleotide exchange factor activity. Predicted to act upstream of or within small GTPase mediated signal transduction. Human ortholog(s) of this gene implicated in Adams-Oliver syndrome. Orthologous to human DOCK6 (dedicator of cytokinesis 6).

Ensembl:

ensembl_id ENSDARG00000035706

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00052161 False 7012 mRNA 0.52 50 55218597 55328548
TCONS_00052162 True 870 lncRNA 0.50 4 55314588 55328513

Neighbor

gene id symbol gene type direction distance location
XLOC_026824 kank2 coding downstream 4467 55161627 ~ 55214130 (-)
XLOC_026823 hbae3 coding downstream 70809 55146418 ~ 55147788 (-)
XLOC_026822 hbae1.3 coding downstream 79470 55138413 ~ 55139127 (-)
XLOC_026821 hbae1.3 coding downstream 90339 55127549 ~ 55128258 (-)
XLOC_026820 hbae1.1 coding downstream 97472 55120330 ~ 55121125 (-)
XLOC_026826 mafga coding upstream 73403 55401951 ~ 55404985 (-)
XLOC_026827 ern1 coding upstream 91628 55420176 ~ 55481157 (-)
XLOC_026828 tex2 coding upstream 158713 55487261 ~ 55537096 (-)
XLOC_026829 axin2 coding upstream 299400 55627948 ~ 55650771 (-)
XLOC_026830 cep112 coding upstream 355901 55684449 ~ 56030117 (-)
XLOC_026814 NA non-coding downstream 334417 54873401 ~ 54884180 (-)
XLOC_026812 NA non-coding downstream 397697 54791553 ~ 54820900 (-)
XLOC_026811 NA non-coding downstream 434276 54748396 ~ 54784321 (-)
XLOC_026805 NA non-coding downstream 1375813 53842532 ~ 53842784 (-)
XLOC_026804 BX004869.1 non-coding downstream 1529169 53689310 ~ 53689428 (-)
XLOC_026831 NA non-coding upstream 509906 55838454 ~ 55839514 (-)
XLOC_026834 CU855917.1 non-coding upstream 1082593 56411141 ~ 56413023 (-)
XLOC_026840 NA non-coding upstream 1708546 57037094 ~ 57037670 (-)
XLOC_026851 CT583687.2 non-coding upstream 2729066 58057614 ~ 58059819 (-)
XLOC_026854 NA non-coding upstream 2779883 58108431 ~ 58110154 (-)

Expression


Co-expression Network