XLOC_026826 (mafga)


Basic Information

Item Value
gene id XLOC_026826
gene name mafga
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 55401951 ~ 55404985 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00052163
AACTCTCTTTGAATTCCCAGACCTGTTGAGCAGGGCAGTGGAGAGCAGCATTCGTGGTATGACTACTACAAACAAGGCAAACAAAGCACTGAAGGTGAAGCGAGAGCCAGGTGAGAATGGCACGAGTCTTACAGATGATGAGCTGGTGTCCATGTCTGTGCGAGAGCTGAATCAGCACTTGCGTGGTCTGACCAAAGATGAAATCCTGCAGTTGAAACAGAGGAGACGCACACTTAAGAACCGGGGCTATGCTGCCAGCTGCCGCGTCAAACGTGTCACTCAgaaggaggagctggagaaaCAGAAGGCAGAGCTTCAGCAGGAGGTGGAGAAGCTCGCCTCTGAGAATGCCAGCATGAAAGTGGAGCTTGATGTTCTGCGCTCCAAATACGAGGCTCTCCAGAGTTTTGCTAGAACTGTGGCCCGCAGTCCAGTGGCAGCTGCCAGGGGCCCTATCACATCAGTCATAGGGCCCCTCATACCAGGCAAAGTTGCTGCCACCAGCGTCATCACCATTGTCAAGTCTAAAACAGAAGCACGGTCATAATGCACAAACGGAGAACATTTTTTAAGTATATTGGTCAGTGTGTAT

Function

symbol description
mafga Enables protein heterodimerization activity. Contributes to DNA binding activity and DNA-binding transcription factor activity. Acts upstream of or within positive regulation of transcription, DNA-templated. Part of transcription regulator complex. Is expressed in brain and ventricular zone. Orthologous to human MAFG (MAF bZIP transcription factor G).

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0045604 regulation of epidermal cell differentiation biological_process
GO:0045893 positive regulation of transcription, DNA-templated biological_process
GO:0005634 nucleus cellular_component
GO:0005667 transcription regulator complex cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0003677 DNA binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function
GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding molecular_function
GO:0046982 protein heterodimerization activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040624-7 Enables protein heterodimerization activity. Contributes to DNA binding activity and DNA-binding transcription factor activity. Acts upstream of or within positive regulation of transcription, DNA-templated. Part of transcription regulator complex. Is expressed in brain and ventricular zone. Orthologous to human MAFG (MAF bZIP transcription factor G).

Ensembl:

ensembl_id ENSDARG00000018109

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00052163 True 592 mRNA 0.51 2 55401951 55404985

Neighbor

gene id symbol gene type direction distance location
XLOC_026825 dock6 coding downstream 73403 55218597 ~ 55328548 (-)
XLOC_026824 kank2 coding downstream 187821 55161627 ~ 55214130 (-)
XLOC_026823 hbae3 coding downstream 254163 55146418 ~ 55147788 (-)
XLOC_026822 hbae1.3 coding downstream 262824 55138413 ~ 55139127 (-)
XLOC_026821 hbae1.3 coding downstream 273693 55127549 ~ 55128258 (-)
XLOC_026827 ern1 coding upstream 15191 55420176 ~ 55481157 (-)
XLOC_026828 tex2 coding upstream 82276 55487261 ~ 55537096 (-)
XLOC_026829 axin2 coding upstream 222963 55627948 ~ 55650771 (-)
XLOC_026830 cep112 coding upstream 279464 55684449 ~ 56030117 (-)
XLOC_026831 NA coding upstream 433469 55838454 ~ 55839514 (-)
XLOC_026814 NA non-coding downstream 517771 54873401 ~ 54884180 (-)
XLOC_026812 NA non-coding downstream 581051 54791553 ~ 54820900 (-)
XLOC_026811 NA non-coding downstream 617630 54748396 ~ 54784321 (-)
XLOC_026805 NA non-coding downstream 1559167 53842532 ~ 53842784 (-)
XLOC_026804 BX004869.1 non-coding downstream 1712523 53689310 ~ 53689428 (-)
XLOC_026834 CU855917.1 non-coding upstream 1006156 56411141 ~ 56413023 (-)
XLOC_026840 NA non-coding upstream 1632109 57037094 ~ 57037670 (-)
XLOC_026851 CT583687.2 non-coding upstream 2652629 58057614 ~ 58059819 (-)
XLOC_026854 NA non-coding upstream 2703446 58108431 ~ 58110154 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000112_03956622_03957718 MAFGA, MAFGB, MAFG coding CI01000112 null 3956622 ~ 3957867 (+)