XLOC_026831



Basic Information


Item Value
gene id XLOC_026831
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 55838454 ~ 55839514 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00053146
CTTTCCCACTGTCATATCGCCATATATTTGGCATGGGTTTTCACCCTGCGTCGAAAAAAATTATCTCACAATTGTTCAAACCAAAGCCTCGCTTTGTCGCTTGTCCGATAAGTGCTCTGGGATGGGTTTAAGCCATCACAGCGAGCTGTACGCAGGGCTTTAAACTAAAGTGTTGAAGGGTGAAATCGATAAAGCGCTAGGATCTGAAGAACCTTCTTCTACCAAATCCACAAAAATTGGAAACACCATGGTGTTGTTTAAAGCGTCTTTTGTGGCCTTGTGCCTGATTGGCTGGGGAAATCAAGCTGAAATCCCATTCATCACCTACACTCAATAGCACCACAGCAGCCTCTAGCTGGCAGGCCAGGTAGGGTGCCGAGCCACACAATGTGGGGGGATTAGCTCGAAAACTGCGGGGACCAGGCCTCTCACTGCAGGCTAACTGGGAAGCGGGGGCCGGACTGGTCAAGGTCACCATCTCCCATCCGGAAGAGAGTGGGAATGGACCTTGGGAACCCGTTGGCGCCGCTGCCGCTCATCGCCAGGCTCAACTCACCACACAGCAGGCTCTTAATTGTTCGTTTTTGACAAAGCGCTCGTTGTCAGAGAAGACTACTGAAGTAACAGTATGTGGTTATTATATGCAGAGTATCGCCATCATGATGGTATGGAAAGACGTAGAaat

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00053146 True 685 lncRNA 0.49 3 55838454 55839514

Neighbor


gene id symbol gene type direction distance location
XLOC_026829 axin2 coding downstream 187683 55627948 ~ 55650771 (-)
XLOC_026828 tex2 coding downstream 301358 55487261 ~ 55537096 (-)
XLOC_026827 ern1 coding downstream 357297 55420176 ~ 55481157 (-)
XLOC_026826 mafga coding downstream 433469 55401951 ~ 55404985 (-)
XLOC_026825 dock6 coding downstream 509906 55218597 ~ 55328548 (-)
XLOC_026832 FQ311920.1 coding upstream 515130 56354644 ~ 56355966 (-)
XLOC_026833 cyth1a coding upstream 569326 56408840 ~ 56574965 (-)
XLOC_026834 CU855917.1 coding upstream 571627 56411141 ~ 56413023 (-)
XLOC_026835 SMIM10 coding upstream 725786 56565300 ~ 56569968 (-)
XLOC_026836 stk19 coding upstream 762315 56601829 ~ 56617097 (-)
XLOC_026814 NA non-coding downstream 954274 54873401 ~ 54884180 (-)
XLOC_026812 NA non-coding downstream 1017554 54791553 ~ 54820900 (-)
XLOC_026811 NA non-coding downstream 1054133 54748396 ~ 54784321 (-)
XLOC_026805 NA non-coding downstream 1995670 53842532 ~ 53842784 (-)
XLOC_026804 BX004869.1 non-coding downstream 2149026 53689310 ~ 53689428 (-)
XLOC_026840 NA non-coding upstream 1197580 57037094 ~ 57037670 (-)
XLOC_026851 CT583687.2 non-coding upstream 2218100 58057614 ~ 58059819 (-)
XLOC_026854 NA non-coding upstream 2268917 58108431 ~ 58110154 (-)
XLOC_026858 CABZ01038493.1 non-coding upstream 2370791 58210305 ~ 58217276 (-)

Expression



Co-expression Network