XLOC_026834 (CU855917.1)


Basic Information

Item Value
gene id XLOC_026834
gene name CU855917.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 56411141 ~ 56413023 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00052184
cctagtcaagtctttaaattgcactttaagggGAATTCCTGTGTCTCGCAAAATAACTAAAAGAAGATGACCtctcatcatagcaaagacaaaagaaatcagtcattGGAAAACAGTAaaaacctctgttaaacagaacttggTActattttaaaaagaataacaaaactcacagaagggctaatagcgttgtcttcaactgtaagtaAATCATAGTATTATAATGCAGTTTTCAATTCAAATAAATGATTATCATTTATTTGCAATATACAAATCATTACAGTAATGACAACCAGAGGCAGTTATTTAATAGCATTAATGTCCCAAACAAAAAGTCCTGATGGTGGCAGACTCAGACAGGTTTAgtgagtttctgcagagctgattAACAGTGGTTGAGTCCAGATCAGGACAGCAGTGGATTTCTTTCACAGCGCTAGTCGTCTTGCTGGTGTTGTGAATAGAAACAGCAGTCTCATCACATAAGTAGTGTTTCCTCAGAGCGTCAGTGGAGATTAATGAGAGCTCAACCTCCCACCGGCCGGACCAGCAGGCCTCGCTCCGCTAATCCAGGCCTAGCGCTAGTGCGGCTCATCGCTCAGACACGAGAGGCTTTAGCACAATCACGTTTTTGCCTCGTCGGCACAGTTTTGACCCACTAAACTCATCTGCTTATCTGTAATCACGCTTTATAAGCTCAGGATGG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097291

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00052184 True 706 lncRNA 0.41 2 56411141 56413023

Neighbor

gene id symbol gene type direction distance location
XLOC_026832 FQ311920.1 coding downstream 55175 56354644 ~ 56355966 (-)
XLOC_026830 cep112 coding downstream 381024 55684449 ~ 56030117 (-)
XLOC_026831 NA coding downstream 571627 55838454 ~ 55839514 (-)
XLOC_026829 axin2 coding downstream 760370 55627948 ~ 55650771 (-)
XLOC_026828 tex2 coding downstream 874045 55487261 ~ 55537096 (-)
XLOC_026835 SMIM10 coding upstream 152277 56565300 ~ 56569968 (-)
XLOC_026836 stk19 coding upstream 188806 56601829 ~ 56617097 (-)
XLOC_026837 zgc:112148 coding upstream 448036 56861059 ~ 56871984 (-)
XLOC_026838 ush1ga coding upstream 469809 56882832 ~ 56896702 (-)
XLOC_026839 hid1a coding upstream 508967 56921990 ~ 56933578 (-)
XLOC_026814 NA non-coding downstream 1526961 54873401 ~ 54884180 (-)
XLOC_026812 NA non-coding downstream 1590241 54791553 ~ 54820900 (-)
XLOC_026811 NA non-coding downstream 1626820 54748396 ~ 54784321 (-)
XLOC_026805 NA non-coding downstream 2568357 53842532 ~ 53842784 (-)
XLOC_026840 NA non-coding upstream 624071 57037094 ~ 57037670 (-)
XLOC_026851 CT583687.2 non-coding upstream 1644591 58057614 ~ 58059819 (-)
XLOC_026854 NA non-coding upstream 1695408 58108431 ~ 58110154 (-)
XLOC_026858 CABZ01038493.1 non-coding upstream 1797282 58210305 ~ 58217276 (-)
XLOC_026860 NA non-coding upstream 1879286 58292309 ~ 58296549 (-)

Expression


Co-expression Network