XLOC_026836 (stk19)


Basic Information

Item Value
gene id XLOC_026836
gene name stk19
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 56601829 ~ 56617097 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00052188
AGATTTACCACTCTCTCTAATCACCAGAGAAGAAGACTCACAGTCAGATACTGCTGGTGTGTTTTGATTACTTGTGAGCAAACATTTCAAACTCAAAAGCAGAAGAAAATGAATTTTTgataactataaaaaaaatcatatattggCTAGATGAGGAAAACGGATAAGTGAACTCTGTAATAATAGCAGCAGTGTTTAAAATCAGCAAAATGAGCCGAAAAAGAGCTCTGATCGCGGACACTTTCTGTTTGAAGAGACGCAGATGTGCAGCTGACAGTTTAACGGGAGAGACTCACGACGGAGCCACTGATATTCGCTCAAGCATACAGTATTTGATGACGCTGTTTTCACGCAAACTTTTCAACGACACACTTCCTCCAGTCGTCCTGAAACACCAGCTGTACAGTTTACACACTGACAAAACCTCAGTGGACAAGCATGTGAATGATTTGCGTGAAAACGGCGAGCTGCTGATGTTCCAGCTGGGCTTCGACTCGGAGGCCTTCGCTCTGGTGTTTGCTGAGGATTACAGAGCCAAAGTCCTTCAGGAGGAAGCTGGAAGAAAAACCCTGGGAGCCGCTGAGAAGTTTCTGGATAAGCTCATTCCCGGCTGCTCCGATTTAAGTTTCAACAAAGACAAAATGCTGAAAGAGTTCCTCTTCTCCGACTCTGAGATCACGCAGCTGGTGAAGTCTGGTCTCCTCACTGTGAGAGATGCAGGCAGCTGGTGGCTCTCAATCCCAAACTCTGGCAGATTCATTAAGTACTTCATTAAAGGGCGTAAAGCTGTACTTAACATGGTGAAGAAATCCAAATACAGTGAAATCTTAAGGACTGAGCTGGAGGAGCGTCGCACAACTGCACAGGTTAAGTTCCAGATGAAGTATCACGTTCATGATATCATTGGAGCAGACTTAGTAGAATGTATACAGACCACATCAGGGACAGTATTACGATACGTGGACGGAAACAACTAACactttttttatgattttcttaTTGTACAAAATGGATTGTAGATGTATTTATtgctatatttttgtttgtaaaacaGAAGCAACTGTGCACAATGTTGTAATAAAAGATTGCCAAACA
>TCONS_00052189
GTGTGTTTTGATTACTTGTGAGCAAACATTTCAAACTCAAAAGCAGAAGAAAATGAATTTTTgataactataaaaaaaatcatatattggCTAGATGAGGAAAACGGATAAGTGAACTCTGTAATAATAGCAGCAGTGTTTAAAATCAGCAAAATGAGCCGAAAAAGAGCTCTGATCGCGGACACTTTCTGTTTGAAGAGACGCAGATGTGCAGCTGACAGTTTAACGGGAGAGACTCACGAATGATTTGCGTGAAAACGGCGAGCTGCTGATGTTCCAGCTGGGCTTCGACTCGGAGGCCTTCGCTCTGGTGTTTGCTGAGGATTACAGAGCCAAAGTCCTTCAGGAGGAAGCTGGAAGAAAAACCCTGGGAGCCGCTGAGAAGTTTCTGGATAAGCTCATTCCCGGCTGCTCCGATTTAAGTTTCAACAAAGACAAAATGCTGAAAGAGTTCCTCTTCTCCGACTCTGAGATCACGCAGCTGGTGAAGTCTGGTCTCCTCACTGTGAGAGATGCAGGCAGCTGGTGGCTCTCAATCCCAAACTCTGGCAGATTCATTAAGTACTTCATTAAAGGGCGTAAAGCTGTACTTAACATGGTGAAGAAATCCAAATACAGTGAAATCTTAAGGACTGAGCTGGAGGAGCGTCGCACAACTGCACAGGTTAAGTTCCAGATGAAGTATCACGTTCATGATATCATTGGAGCAGACTTAGTAGAATGTATACAGACCACATCAGGGACAGTATTACGATACGTGGACGGAAACAACTAACactttttttatgattttcttaTTGTACAAAATGGATTGTAGATGTA
>TCONS_00052190
TTAATCTAcccaaattaaaagaaataagacttttttccccAGAAAAGAGAAACGATGCACTTGTGTCTGATGTTTATTCTTCAGACGGAGCCACTGATATTCGCTCAAGCATACAGTATTTGATGACGCTGTTTTCACGCAAACTTTTCAACGACACACTTCCTCCAGTCGTCCTGAAACACCAGCTGTACAGTTTACACACTGACAAAACCTCAGTGGACAAGCATGTGAATGATTTGCGTGAAAACGGCGAGCTGCTGATGTTCCAGCTGGGCTTCGACTCGGAGGCCTTCGCTCTGGTGTTTGCTGAGGATTACAGAGCCAAAGTCCTTCAGGAGGAAGCTGGAAGAAAAACCCTGGGAGCCGCTGAGAAGTTTCTGGATAAGCTCATTCCCGGCTGCTCCGATTTAAGTTTCAACAAAGACAAAATGCTGAAAGAGTTCCTCTTCTCCGACTCTGAGATCACGCAGCTGGTGAAGTCTGGTCTCCTCACTGTGAGAGATGCAGGCAGCTGGTGGCTCTCAATCCCAAACTCTGGCAGATTCATTAAGTACTTCATTAAAGGGCGTAAAGCTGTACTTAACATGGTGAAGAAATCCAAATACAGTGAAATCTTAAGGACTGAGCTGGAGGAGCGTCGCACAACTGCACAGGTTAAGTTCCAGATGAAGTATCACGTTCATGATATCATTGGAGCAGACTTAGTAGAATGTATACAGACCACATCAGGGACAGTATTACGATACGTGGACGGAAACAACTAACactttttttatgattttctta

Function

symbol description
stk19 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in positive regulation of Ras protein signal transduction and protein phosphorylation. Orthologous to human STK19 (serine/threonine kinase 19).

GO:

id name namespace
GO:0046579 positive regulation of Ras protein signal transduction biological_process
GO:0006468 protein phosphorylation biological_process
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
ko01001 Protein kinases

ZFIN:

id description
ZDB-GENE-000616-11 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in positive regulation of Ras protein signal transduction and protein phosphorylation. Orthologous to human STK19 (serine/threonine kinase 19).

Ensembl:

ensembl_id ENSDARG00000086628

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00052188 False 1095 mRNA 0.42 6 56601829 56617097
TCONS_00052189 False 822 nonsense_mediated_decay 0.43 5 56601900 56617041
TCONS_00052190 True 786 lncRNA 0.44 5 56601925 56614135

Neighbor

gene id symbol gene type direction distance location
XLOC_026833 cyth1a coding downstream 26864 56408840 ~ 56574965 (-)
XLOC_026835 SMIM10 coding downstream 31861 56565300 ~ 56569968 (-)
XLOC_026834 CU855917.1 coding downstream 188806 56411141 ~ 56413023 (-)
XLOC_026832 FQ311920.1 coding downstream 245863 56354644 ~ 56355966 (-)
XLOC_026830 cep112 coding downstream 571712 55684449 ~ 56030117 (-)
XLOC_026837 zgc:112148 coding upstream 243962 56861059 ~ 56871984 (-)
XLOC_026838 ush1ga coding upstream 265735 56882832 ~ 56896702 (-)
XLOC_026839 hid1a coding upstream 304893 56921990 ~ 56933578 (-)
XLOC_026840 NA coding upstream 419997 57037094 ~ 57037670 (-)
XLOC_026841 socs3a coding upstream 806040 57423137 ~ 57425961 (-)
XLOC_026831 NA non-coding downstream 762315 55838454 ~ 55839514 (-)
XLOC_026814 NA non-coding downstream 1717649 54873401 ~ 54884180 (-)
XLOC_026812 NA non-coding downstream 1780929 54791553 ~ 54820900 (-)
XLOC_026811 NA non-coding downstream 1817508 54748396 ~ 54784321 (-)
XLOC_026851 CT583687.2 non-coding upstream 1440517 58057614 ~ 58059819 (-)
XLOC_026854 NA non-coding upstream 1491334 58108431 ~ 58110154 (-)
XLOC_026858 CABZ01038493.1 non-coding upstream 1593208 58210305 ~ 58217276 (-)
XLOC_026860 NA non-coding upstream 1675212 58292309 ~ 58296549 (-)

Expression


Co-expression Network