G765100 (LOC106597704)


Basic Information

Item Value
gene id G765100
gene name LOC106597704
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 4446327 ~ 4536079 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU870890
TTAAAGCAGTCTGTCCTGACTCAGCTCAACAGTCTCCAGTCTACCAACTGGTCTCTGATATAACTATTTAAAGCAGTCTGTCCTGACTCAGCTCAACAGTCTCCAGTCTACCAACTGGTCTCTGTTATAACTATTTCAATCAGTCTGTCCTGACTCAGCTCAACAGTCTCCAGTCTACCAACTGGTCTCTGTGATAACTATTTCAATCAGTCTGTCCTGACTCAGCTCAACAGTCTCCAGTCTACCAACTGGTCTCTGTAATAACTATTTCAATCAGTCGGTCCTGACTCAGCTCAACAGTCTCCAGTCTACCAACTGGTCTCTGTAACTTCATCTTTGTCTCTGTGGTGTACAGTCTTCAGGTGATGATGGGGTTATTGAATCatttctctactctcctcctcctctctctccttcctcctgttctctctcatgtAGTGGATAAGTTCAGTGATGTTCCACAGTGCCAGAAGTTCTTCCTGGAGGGGACAACTCCAAATCTCCCAGGTATTTTGGTTGGTGGGACAGTCCAGGACCAGAACCGCTACAAGCCGATTTGCCAGAAGTACAAGAACAACTACAGGTTTGCAACTCTCTACGACACGACCAACAAGATCCCTGTGTTCTCAGCCTACACCTTCTCTGGTCCTCCTACAGACCCCAGACCAAAATATCAACCCTGGATGATCGAGCCCCAGCTTGAAGATGTAGAAGATGTAGAAGAGATGAAAACCCAACGTGAGGTGCTTAATAATAACAAAAGAGCCAACCATCAGGCTGTGGACGCAGACTACGATGCAACAATAAGTAGCATGGATCTGGACAGAGGTCACCTGTTCCCATGTAACGCCGCACCTGATGATGCTACCATGAGGTCCACTTTCACCCTGACAAACGCCGTTCCCCAGGAAAGAGGCTTTAACCGAGGCAGATGGTGTAAAATGGAGGGCAGAGTCAGAGAAGCTCTTGTGAATAACTGtaagaataacaacaacaagatAGAAGCCTATGTGGTGACTG
>TU870887
TTATTAAAGCAGTCTGTCCTGACTCAGCTCAACAGTCTCCAGTCTACCAACTGGTCTCTGTGATAACTATTTCAATCAGTCTGTCCTGACTCAGCTCAACAGTCTCCAGTCTACCAACTGGTCTCTGTAATAACTATTTCAATCAGTCGGTCCTGACTCAGCTCAACAGTCTCCAGTCTACCAACTGGTCTCTGTAACTTCATCTTTGTCTCTGTGGTGTACAGTCTTCAGGTGATGATGGGGTTATTGAATCatttctctactctcctcctcctctctctccttcctcctgttctctctcatgtAGTGGATAAGTTCAGTGATGTTCCACAGTGCCAGAAGTTCTTCCTGGAGGGGACAACTCCAAATCTCCCAGGTATTTTGGTTTATGGGACAGTCAAGGACCAGAACCGCTACAAGCCGATCTGCCAGTTTTACCAGGACACCTACAGGTTTGCAACTCTCTACGACACGACCAACAAGATCCCTGTGTTCTCAGCCTACACCTTCACTGGTCCTCCTACAGACCCCAGACCAAAAGATCCCTGGATGATGGAGCCCCAGCTCGACGGGATCGACCGCCCTGAAATGCAGAGACAAGATGGAGGCAGTTACGAACACCAGGCTGACCAAAACGACTATAGAGACTCACAAAATAAAGGGGTGAACAGAGGTCACCTCTTCCCAAATTCACATGCTCATAACCTTGATACTCAGAAGTCCACATTTACCCTGACCAACATCGTTCCCCAGGTGGTGTCCTTCAACGGGGGCAGCTGGAGAAAAATGGAGGAACATGTCAGAGAAAAGCTGATGACGGACTGTATTAATAACAACAGGAATATAGAGGCCCATGTGGTGACTGGAGCAGTTCCCAGCAGCAGCAACAAACTGAACAAAAAAGTGAACATCCCAGA

Function

NR:

description
endonuclease domain-containing 1 protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU870890 False 1020 TUCP 0.47 4 4446327 4536079
TU870887 True 917 TUCP 0.48 2 4466567 4467708

Neighbor

gene id symbol gene type direction distance location
LOC110515469 LOC106591982 coding downstream 53013 4343494 ~ 4393314 (-)
LOC110531315 LOC106578219 coding downstream 262815 4043130 ~ 4183512 (-)
LOC118966151 LOC106587785 coding downstream 412790 4012152 ~ 4033537 (-)
LOC110513230 LOC106578212 coding downstream 478999 3947831 ~ 3967328 (-)
LOC110498424 LOC106578213 coding downstream 499776 3903081 ~ 3946551 (-)
LOC118965975 NA coding upstream 28681 4564760 ~ 4565401 (-)
LOC110515555 NA coding upstream 38084 4574163 ~ 4575872 (-)
LOC118965976 rbm46 coding upstream 339003 4875082 ~ 4879698 (-)
rbm46 rbm46 coding upstream 343825 4879904 ~ 4900797 (-)
LOC118965977 LOC106578182 coding upstream 365807 4901886 ~ 4916456 (-)
G765130 NA non-coding downstream 1463 4444410 ~ 4444864 (-)
G765124 NA non-coding downstream 19828 4424750 ~ 4426499 (-)
G765123 NA non-coding downstream 21895 4424008 ~ 4424432 (-)
G765092 NA non-coding downstream 110265 4332948 ~ 4336062 (-)
G765088 NA non-coding downstream 116186 4329917 ~ 4330141 (-)
G765168 NA non-coding upstream 45752 4581831 ~ 4582866 (-)
G765182 NA non-coding upstream 77370 4613449 ~ 4614168 (-)
G765183 NA non-coding upstream 80834 4616913 ~ 4629021 (-)
G765184 NA non-coding upstream 84637 4620716 ~ 4621245 (-)
G765188 NA non-coding upstream 101060 4637139 ~ 4638023 (-)
G765059 NA other downstream 126501 4270732 ~ 4319826 (-)
LOC110498423 LOC105006500 other downstream 587434 3851852 ~ 3901549 (-)
G763961 NA other downstream 1147224 3286243 ~ 3299103 (-)
G763719 NA other downstream 1959426 2473098 ~ 2486901 (-)
G765347 NA other upstream 519401 5055480 ~ 5057322 (-)
G765579 LOC101077030 other upstream 761397 5297476 ~ 5298437 (-)
G766599 LOC106578100 other upstream 1665290 6201369 ~ 6209209 (-)
G766640 NA other upstream 1715518 6251597 ~ 6262155 (-)

Expression


Co-expression Network