G765188


Basic Information

Item Value
gene id G765188
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 4637139 ~ 4638023 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU871042
GTCTCTCTGTATTTAAAGCCTTTCTCTCTATCTAAAGCCTCTCTTTGGAGAGTAGGCCTCTCTCTATCTAAAGCCTCTCTCTGGAGAGTAGGCCTCTCTCTATCTAAAGCCTCTCTCTGTTTAAagcctctctctatttaaagtctctctctggagagtaggcctctctctatttaaagcctctctctatttaaagtctctctctggagagtagttctctctctatctaaagCCTCTCTCTGGAGAGTAGGCCTCTCTATTTAAAGTCTCTCTCTGGAGAGTAGGTCTCTCTCTATCTAAAGCCTCTCTCTGGAGAGTAggcctctctctatttaaagtctctctctggagagtgggtctctctctatttaaagcctCTCTCTATCTAAAGCCTCTCACTGGAGAGTAggtctctctctatttaaagcctCTCTCTATCTAAAGCCTCTCACTGGAGAGTAggcctctctctatttaaagcctCTCTTTGGAGAGTAGGCCTCTCTCTATCTAAAGCCTCTCTCTGGAGAGTAggcctctctctatttaaagtctctctctggagagtgggtctctctctatttaa

Function

NR:

description
PREDICTED: calponin homology domain-containing protein DDB_G0272472 isoform X6

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU871042 True 586 lncRNA 0.44 2 4637139 4638023

Neighbor

gene id symbol gene type direction distance location
LOC110515555 NA coding downstream 61273 4574163 ~ 4575872 (-)
LOC118965975 NA coding downstream 71738 4564760 ~ 4565401 (-)
LOC118965974 NA coding downstream 101099 4534165 ~ 4536040 (-)
LOC118966171 NA coding downstream 107546 4528651 ~ 4529593 (-)
LOC110518373 LOC106597704 coding downstream 169452 4465470 ~ 4467687 (-)
LOC118965976 rbm46 coding upstream 237059 4875082 ~ 4879698 (-)
rbm46 rbm46 coding upstream 241881 4879904 ~ 4900797 (-)
LOC118965977 LOC106578182 coding upstream 263863 4901886 ~ 4916456 (-)
LOC110532986 LOC106578168 coding upstream 285008 4922850 ~ 4933486 (-)
LOC110518233 LOC106594193 coding upstream 347789 4985812 ~ 5018523 (-)
G765183 NA non-coding downstream 8118 4616913 ~ 4629021 (-)
G765184 NA non-coding downstream 15894 4620716 ~ 4621245 (-)
G765182 NA non-coding downstream 22971 4613449 ~ 4614168 (-)
G765168 NA non-coding downstream 54273 4581831 ~ 4582866 (-)
G765143 NA non-coding downstream 74927 4529098 ~ 4562212 (-)
G765210 NA non-coding upstream 47147 4685170 ~ 4686515 (-)
G765214 NA non-coding upstream 62262 4700285 ~ 4892679 (-)
G765217 NA non-coding upstream 70727 4708750 ~ 4709183 (-)
G765224 NA non-coding upstream 122140 4760163 ~ 4762575 (-)
G765246 NA non-coding upstream 163932 4801955 ~ 4802200 (-)
G765100 LOC106597704 other downstream 101060 4446327 ~ 4536079 (-)
G765059 NA other downstream 317313 4270732 ~ 4319826 (-)
LOC118966151 LOC106587785 other downstream 620730 4012152 ~ 4033537 (-)
LOC110498423 LOC105006500 other downstream 778246 3851852 ~ 3901549 (-)
G765347 NA other upstream 417457 5055480 ~ 5057322 (-)
G765579 LOC101077030 other upstream 659453 5297476 ~ 5298437 (-)
G766599 LOC106578100 other upstream 1563346 6201369 ~ 6209209 (-)
G766640 NA other upstream 1613574 6251597 ~ 6262155 (-)
G766665 NA other upstream 1702598 6340621 ~ 6365895 (-)

Expression


Co-expression Network