G766682 (LOC106578097)


Basic Information

Item Value
gene id G766682
gene name LOC106578097
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 6330903 ~ 6334035 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU872997
ATTTTATGGTTTCTTTGAATTAGTTCACCACACACAGCCAGTGACAGCCATCTAGCTGGAGCTGACCAAAATTTTAAACAACCTACATAAATTAGCAATATATTTGTGCTACCTGCTCCCATAAAAGGCGATTATCAATGTATACTAGCTTCAATCTATTATCCCTATAATTGTATTCAGACATTCAATGTGTTATTTGAATCAGTAACGTTACACCACACACACGATCGATAGCCAGCTGACAGTCAATTAGACGCGCACCCCATACAGAGTTCGTTAATTCACCCTGGAGTGCCAGAGGCTAAAGCTAATGAGCAGTTACCGCCTTTTGCCTCTGTAGGGCAGTATACAGCTGACCAAAAATGTTATTTTCTTAGGAGGATGAAgaacaaaatatatttgagaaattgtattttatttaaggACAAAGGCTACAAAGATGGCACAAGTAATACAAAGCATTTATTTTTAAACTAAATATAACAATTTAGTCATTCAAGTGCAACAGAAGAAATCAATTCTCCACCAGCTCAGTTTAGCTCTCATATAATTCTGAGTTTGACTTCAATGCTGCAAGAGGGAGATGTTATGTTGTGATTTAAGCcaataattaaaaataaataaactcttTGGTAAGATATTATTGAGAGAGATTACACAGAAAAGTGTGAAAACTGATCATATAGTAAATAAATTAACATGAATAAATAATGTATTAAATGTGTGTTGTGTGCAACCTCCTTTTAGACCAAGTCAGAGGACCAAAGTTTGAGACCGTTTTTTCGTACCCTCATGTCCCCCATAGTTAGTTAATTTCATGGTATGACAACGTTCTCCTTTTATGAAACAAACATAACACACTTGGGGTACATTCAATAGGTACAAGGATAGTGAAACATACGTTATCAGGTCTCATCTTGGGCTACGTTCATTAGGCACATGGATAGTAAAAAATACGTTATCAGGTCTCATCTTGGGCTACGTTCATTAGGCACATGGATAGTGAAACATACGTTATCAGGTCTCATCTTGGGCTACGTTCATTAGGCACATGGATAGTGAAACATACGTTATCAGGTCTCATCTTGGGCTGCGTTCATTAGGTACATGGATAGTGAAACATATGTCTCCCTCAGGTTGCACAACACTGAAACCACCCTGCAGACGGTCCTCCAGAGAGGTATGAACTTCACCCTGTGAGGAAGTGTTAAAcccattccctatttagtgcactagtaCAATAGTGTGCTATTTTGGAATTCAGAATAAGAATGAGTTAAACTTTGTGTACTTCCTGGTGTTAATCAGGTGCTGTTCATATTGATCATTGATAAACCCGTATGTACTAGATCAATATCACTGATTGATTAATCAACTGAACCATACATTGAGGTGAACACAGGTCATTTGCGTTGAGAACACAAACGGAACGCTCTGTCCAAGCCAGCCTCAATCTCAAATTACAATATGGGCGTTACATAACCTGATTGGAACAATTGCAGTTTACAGATTAGATGAACAGGTTTGTGAATCCTATCTGTATTCTGCTAATGCTGAGGAATGGTGCATCTCccttgatggtggtggtgatgatgatgagtcAGGTGTGAGCGTCACGCTGTACAGGTTAGTGACGAAGGTCTCCCACCCTCGACGGAACGCTCGGTCGAAAGTCTTGAAGGGGATAGAATGAATAATCAATACAGGTGACCAAGAAAACATTGAAATAGATTTTCAAAATGGCCTACAGAGTTAATTTAGCATTTGGGCTCATGGGGTGGTTGACGTAAACAGATCAGCCATTGGACTCTGACCAGACCGTTCATGATATGGGTATAGAGggtcatataatgtttacataaatAACTAATTACTGGCTGCTATTCTTGGAATGTAACTGTGGAACGTGGAACCTGGaactttaacccattgttcctCCCTCTAGGAGAATTccacagggaggggaggggagaatgTGTTAAGTAATCCGTGTCCTGTCCTCTGTTAAAATGGAACTAAGAAGGAGGTTAACAGGTTGTAGCAGGTTGTAGCAACATCAACATTAACAGGTGGAGGCAAACAGGTGGAGGCAAAACACACACTACcatcctctctcgttctctcacctTGCGGTAGTTCTTCAGCGtgctcctcttcctcatcaccttcatctcctcctgtctcttcatctcctcctcctcttcttccctccctctcttattGTCCTTTATCAGAACCTGGTCATCTGCTTCTTCTCTGCTCGCAAAGTGGACCAGCGTCCTCTCatcttctgttctctctttctccctctgtccttcttcAGTCTCTaccctcacctccacctccaGGACCTCCAGGACAGGGGTCTGCGTCTCCATCTCCGTACCCAGGATCGGGCCCTCCTCCCTGGGGGAGACCGTCAGGGGCTCGGCCCCCTGTTTCTTCCCGGTGCTCCTCCCCCAGCGGCTCCTTCTCACTTCCACCGCAGTGACCTCCAGGACAGGGGCCTCCATCTCCGTACCCAGGATCTGGTCCCCCTGCCTAGGGGAGATCGCCTGGGGTTTGGCCTTCCTGGAGCTTCTTCTCCAGCGGGAGCTGAGCCGGCTGGGTTTCCTTCGGAGGAGAGTGGTGTCGTCATCTTCCATCATTCCCTCGTTGAAGTCAAACACCCCAGGCTCTCCCCGGTCCGTCTCTCCCCCCGTAGAGAGCTCTGTGGCTGGGCACGATCCCCCccagtccccctctctcccccgctcctcctcctctcttcccatcTCGGGCTCATCCAGGCGACCGTAGAACCCAGAACTCTTGTCCAGGTACTTTGGAGACCTGACGGAACCGTTTCTGGGACTCTTTCCGATCGCCATCTTTTCttttgtctctctccttctcttctcctttgcAATGCAATGTATCTCTCTGTTGTTTTTATGTCTTTAAAGCTGggtgagagaaagggggagagagaaaggggggtgagagaaaggggggagagaga
>TU872998
ATTTTATGGTTTCTTTGAATTAGTTCACCACACACAGCCAGTGACAGCCATCTAGCTGGAGCTGACCAAAATTTTAAACAACCTACATAAATTAGCAATATATTTGTGCTACCTGCTCCCATAAAAGGCGATTATCAATGTATACTAGCTTCAATCTATTATCCCTATAATTGTATTCAGACATTCAATGTGTTATTTGAATCAGTAACGTTACACCACACACACGATCGATAGCCAGCTGACAGTCAATTAGACGCGCACCCCATACAGAGTTCGTTAATTCACCCTGGAGTGCCAGAGGCTAAAGCTAATGAGCAGTTACCGCCTTTTGCCTCTGTAGGGCAGTATACAGCTGACCAAAAATGTTATTTTCTTAGGAGGATGAAgaacaaaatatatttgagaaattgtattttatttaaggACAAAGGCTACAAAGATGGCACAAGTAATACAAAGCATTTATTTTTAAACTAAATATAACAATTTAGTCATTCAAGTGCAACAGAAGAAATCAATTCTCCACCAGCTCAGTTTAGCTCTCATATAATTCTGAGTTTGACTTCAATGCTGCAAGAGGGAGATGTTATGTTGTGATTTAAGCcaataattaaaaataaataaactcttTGGTAAGATATTATTGAGAGAGATTACACAGAAAAGTGTGAAAACTGATCATATAGTAAATAAATTAACATGAATAAATAATGTATTAAATGTGTGTTGTGTGCAACCTCCTTTTAGACCAAGTCAGAGGACCAAAGTTTGAGACCGTTTTTTCGTACCCTCATGTCCCCCATAGTTAGTTAATTTCATGGTATGACAACGTTCTCCTTTTATGAAACAAACATAACACACTTGGGGTACATTCAATAGGTACAAGGATAGTGAAACATACGTTATCAGGTCTCATCTTGGGCTACGTTCATTAGGCACATGGATAGTAAAAAATACGTTATCAGGTCTCATCTTGGGCTACGTTCATTAGGCACATGGATAGTGAAACATACGTTATCAGGTCTCATCTTGGGCTGCGTTCATTAGGTACATGGATAGTGAAACATATGTCTCCCTCAGGTTGCACAACACTGAAACCACCCTGCAGACGGTCCTCCAGAGAGGTATGAACTTCACCCTGTGAGGAAGTGTTAAAcccattccctatttagtgcactagtaCAATAGTGTGCTATTTTGGAATTCAGAATAAGAATGAGTTAAACTTTGTGTACTTCCTGGTGTTAATCAGGTGCTGTTCATATTGATCATTGATAAACCCGTATGTACTAGATCAATATCACTGATTGATTAATCAACTGAACCATACATTGAGGTGAACACAGGTCATTTGCGTTGAGAACACAAACGGAACGCTCTGTCCAAGCCAGCCTCAATCTCAAATTACAATATGGGCGTTACATAACCTGATTGGAACAATTGCAGTTTACAGATTAGATGAACAGGTTTGTGAATCCTATCTGTATTCTGCTAATGCTGAGGAATGGTGCATCTCccttgatggtggtggtgatgatgatgagtcAGGTGTGAGCGTCACGCTGTACAGGTTAGTGACGAAGGTCTCCCACCCTCGACGGAACGCTCGGTCGAAAGTCTTGAAGGGGATAGAATGAATAATCAATACAGGTGACCAAGAAAACATTGAAATAGATTTTCAAAATGGCCTACAGAGTTAATTTAGCATTTGGGCTCATGGGGTGGTTGACGTAAACAGATCAGCCATTGGACTCTGACCAGACCGTTCATGATATGGGTATAGAGggtcatataatgtttacataaatAACTAATTACTGGCTGCTATTCTTGGAATGTAACTGTGGAACGTGGAACCTGGaactttaacccattgttcctCCCTCTAGGAGAATTccacagggaggggaggggagaatgTGTTAAGTAATCCGTGTCCTGTCCTCTGTTAAAATGGAACTAAGAAGGAGGTTAACAGGTTGTAGCAGGTTGTAGCAACATCAACATTAACAGGTGGAGGCAAACAGGTGGAGGCAAAACACACACTACcatcctctctcgttctctcacctTGCGGTAGTTCTTCAGCGtgctcctcttcctcatcaccttcatctcctcctgtctcttcatctcctcctcctcttcttccctccctctcttattGTCCTTTATCAGAACCTGGTCATCTGCTTCTTCTCTGCTCGCAAAGTGGACCAGCGTCCTCTCatcttctgttctctctttctccctctgtccttcttcAGTCTCTaccctcacctccacctccaGGACCTCCAGGACAGGGGTCTGCGTCTCCATCTCCGTACCCAGGATCGGGCCCTCCTCCCTGGGGGAGACCGTCAGGGGCTCGGCCCCCTGTTTCTTCCCGGTGCTCCTCCCCCAGCGGCTCCTTCTCACTTCCACCGCAGTGACCTCCAGGACAGGGGCCTCCATCTCCGTACCCAGGATCTGGTCCCCCTGCCTAGGGGAGATCGCCTGGGGTTTGGCCTTCCTGGAGCTTCTTCTCCAGCGGGAGCTGAGCCGGCTGGGTTTCCTTCGGAGGAGAGTGGTGTCGTCATCTTCCATCATTCCCTCGTTGAAGTCAAACACCCCAGGCTCTCCCCGGTCCGTCTCTCCCCCCGTAGAGAGCTCTGTGGCTGGGCACGATCCCCCccagtccccctctctcccccgctcctcctcctctcttcccatcTCGGGCTCATCCAGGCGACCGTAGAACCCAGAACTCTTGTCCAGGTACTTTGGAGACCTGACGGAACCGTTTCTGGGACTCTTTCCGATCGCCATCTTTTCttttgtctctctccttctcttctcctttgcAATGCAATGTATCTCTCTGTTGTTTTTATGTCTTTAAAGCTGggtgagagaaagggggagagagaaaggggggtgagagaaaggggggagagaga
>TU873000
ATTTTATGGTTTCTTTGAATTAGTTCACCACACACAGCCAGTGACAGCCATCTAGCTGGAGCTGACCAAAATTTTAAACAACCTACATAAATTAGCAATATATTTGTGCTACCTGCTCCCATAAAAGGCGATTATCAATGTATACTAGCTTCAATCTATTATCCCTATAATTGTATTCAGACATTCAATGTGTTATTTGAATCAGTAACGTTACACCACACACACGATCGATAGCCAGCTGACAGTCAATTAGACGCGCACCCCATACAGAGTTCGTTAATTCACCCTGGAGTGCCAGAGGCTAAAGCTAATGAGCAGTTACCGCCTTTTGCCTCTGTAGGGCAGTATACAGCTGACCAAAAATGTTATTTTCTTAGGAGGATGAAgaacaaaatatatttgagaaattgtattttatttaaggACAAAGGCTACAAAGATGGCACAAGTAATACAAAGCATTTATTTTTAAACTAAATATAACAATTTAGTCATTCAAGTGCAACAGAAGAAATCAATTCTCCACCAGCTCAGTTTAGCTCTCATATAATTCTGAGTTTGACTTCAATGCTGCAAGAGGGAGATGTTATGTTGTGATTTAAGCcaataattaaaaataaataaactcttTGGTAAGATATTATTGAGAGAGATTACACAGAAAAGTGTGAAAACTGATCATATAGTAAATAAATTAACATGAATAAATAATGTATTAAATGTGTGTTGTGTGCAACCTCCTTTTAGACCAAGTCAGAGGACCAAAGTTTGAGACCGTTTTTTCGTACCCTCATGTCCCCCATAGTTAGTTAATTTCATGGTATGACAACGTTCTCCTTTTATGAAACAAACATAACACACTTGGGGTACATTCAATAGGTACAAGGATAGTGAAACATACGTTATCAGGTCTCATCTTGGGCTACGTTCATTAGGCACATGGATAGTGAAACATACGTTATCAGGTCTCATCTTGGGCTACGTTCATTAGGCACATGGATAGTGAAACATACGTTATCAGGTCTCATCTTGGGCTACGTTCATTAGGCACATGGATAGTGAAACATACGTTATCAGGTCTCATCTTGGGCTGCGTTCATTAGGTACATGGATAGTGAAACATATGTCTCCCTCAGGTTGCACAACACTGAAACCACCCTGCAGACGGTCCTCCAGAGAGGTATGAACTTCACCCTGTGAGGAAGTGTTAAAcccattccctatttagtgcactagtaCAATAGTGTGCTATTTTGGAATTCAGAATAAGAATGAGTTAAACTTTGTGTACTTCCTGGTGTTAATCAGGTGCTGTTCATATTGATCATTGATAAACCCGTATGTACTAGATCAATATCACTGATTGATTAATCAACTGAACCATACATTGAGGTGAACACAGGTCATTTGCGTTGAGAACACAAACGGAACGCTCTGTCCAAGCCAGCCTCAATCTCAAATTACAATATGGGCGTTACATAACCTGATTGGAACAATTGCAGTTTACAGATTAGATGAACAGGTTTGTGAATCCTATCTGTATTCTGCTAATGCTGAGGAATGGTGCATCTCccttgatggtggtggtgatgatgatgagtcAGGTGTGAGCGTCACGCTGTACAGGTTAGTGACGAAGGTCTCCCACCCTCGACGGAACGCTCGGTCGAAAGTCTTGAAGGGGATAGAATGAATAATCAATACAGGTGACCAAGAAAACATTGAAATAGATTTTCAAAATGGCCTACAGAGTTAATTTAGCATTTGGGCTCATGGGGTGGTTGACGTAAACAGATCAGCCATTGGACTCTGACCAGACCGTTCATGATATGGGTATAGAGggtcatataatgtttacataaatAACTAATTACTGGCTGCTATTCTTGGAATGTAACTGTGGAACGTGGAACCTGGaactttaacccattgttcctCCCTCTAGGAGAATTccacagggaggggaggggagaatgTGTTAAGTAATCCGTGTCCTGTCCTCTGTTAAAATGGAACTAAGAAGGAGGTTAACAGGTTGTAGCAGGTTGTAGCAACATCAACATTAACAGGTGGAGGCAAACAGGTGGAGGCAAAACACACACTACcatcctctctcgttctctcacctTGCGGTAGTTCTTCAGCGtgctcctcttcctcatcaccttcatctcctcctgtctcttcatctcctcctcctcttcttccctccctctcttattGTCCTTTATCAGAACCTGGTCATCTGCTTCTTCTCTGCTCGCAAAGTGGACCAGCGTCCTCTCatcttctgttctctctttctccctctgtccttcttcAGTCTCTaccctcacctccacctccaGGACCTCCAGGACAGGGGTCTGCGTCTCCATCTCCGTACCCAGGATCGGGCCCTCCTCCCTGGGGGAGACCGTCAGGGGCTCGGCCCCCTGTTTCTTCCCGGTGCTCCTCCCCCAGCGGCTCCTTCTCACTTCCACCGCAGTGACCTCCAGGACAGGGGCCTCCATCTCCGTACCCAGGATCTGGTCCCCCTGCCTAGGGGAGATCGCCTGGGGTTTGGCCTTCCTGGAGCTTCTTCTCCAGCGGGAGCTGAGCCGGCTGGGTTTCCTTCGGAGGAGAGTGGTGTCGTCATCTTCCATCATTCCCTCGTTGAAGTCAAACACCCCAGGCTCTCCCCGGTCCGTCTCTCCCCCCGTAGAGAGCTCTGTGGCTGGGCACGATCCCCCccagtccccctctctcccccgctcctcctcctctcttcccatcTCGGGCTCATCCAGGCGACCGTAGAACCCAGAACTCTTGTCCAGGTACTTTGGAGACCTGACGGAACCGTTTCTGGGACTCTTTCCGATCGCCATCTTTTCttttgtctctctccttctcttctcctttgcAATGCAATGTATCTCTCTGTTGTTTTTATGTCTTTAAAGCTGggtgagagaaagggggagagagaaaggggggtgagagaaaggggggagagaga

Function

NR:

description
PREDICTED: uncharacterized protein LOC106578097 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU872997 False 3001 lncRNA 0.45 3 6330903 6334035
TU872998 False 2945 lncRNA 0.45 3 6330903 6334035
TU873000 True 3001 lncRNA 0.45 3 6330903 6334035

Neighbor

gene id symbol gene type direction distance location
rcor2 rcor2 coding downstream 43752 6265331 ~ 6287151 (-)
exoc6b LOC106560516 coding downstream 140489 6066184 ~ 6190414 (-)
LOC110531356 LOC106578148 coding downstream 306154 5982772 ~ 6024749 (-)
LOC118966152 NA coding downstream 517028 5813423 ~ 5813875 (-)
LOC110511386 LOC106560508 coding downstream 1083281 5194243 ~ 5247622 (-)
LOC118936332 LOC106578081 coding upstream 6541 6340576 ~ 6351208 (-)
LOC118966221 NA coding upstream 6765 6340800 ~ 6340873 (-)
LOC118966228 NA coding upstream 8173 6342208 ~ 6342277 (-)
LOC118966211 NA coding upstream 9275 6343310 ~ 6343381 (-)
LOC110531397 NA coding upstream 24115 6358150 ~ 6365572 (-)
G766657 NA non-coding downstream 7032 6300638 ~ 6323871 (-)
G766658 NA non-coding downstream 9722 6320193 ~ 6321181 (-)
G766640 NA non-coding downstream 68748 6251597 ~ 6262155 (-)
G766633 NA non-coding downstream 94419 6235941 ~ 6236484 (-)
G766687 NA non-coding upstream 4557 6338592 ~ 6338812 (-)
G766688 NA non-coding upstream 4994 6339029 ~ 6339646 (-)
G766665 NA non-coding upstream 6586 6340621 ~ 6365895 (-)
G766696 NA non-coding upstream 35680 6369715 ~ 6369926 (-)
G766697 NA non-coding upstream 36205 6370240 ~ 6370475 (-)
G766599 LOC106578100 other downstream 121694 6201369 ~ 6209209 (-)
G765579 LOC101077030 other downstream 1032466 5297476 ~ 5298437 (-)
G765347 NA other downstream 1273581 5055480 ~ 5057322 (-)
LOC110515555 NA other downstream 1755031 4574163 ~ 4575872 (-)
G766749 NA other upstream 123168 6457203 ~ 6464631 (-)
G766850 LOC106578109 other upstream 278044 6612079 ~ 6613412 (-)
LOC110531366 LOC106578102 other upstream 538801 6851197 ~ 6882912 (-)
LOC110531380 LOC106578126 other upstream 631419 6963142 ~ 6969857 (-)

Expression


Co-expression Network