G766687



Basic Information


Item Value
gene id G766687
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 6338592 ~ 6338812 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU873005
GAGGACTATTTATTTAAAATATACATCTTGTAGTGTACAACAACATAGTGGACATGCACGAACATTAAACCCCCAAACTACTGCATCCATGTCAACATctaaaaaaacaatacaaatatgAATATCTCTTATCATTCATTAATCCCCTCAGAACTGTTCCCCCTCAAAAATGTTCCCCTCAGAACTGTTCCCCCTCAAAAATGTTCCCCTCAGAACTGTTC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU873005 True 221 lncRNA 0.37 1 6338592 6338812

Neighbor


gene id symbol gene type direction distance location
rcor2 rcor2 coding downstream 51441 6265331 ~ 6287151 (-)
exoc6b LOC106560516 coding downstream 148178 6066184 ~ 6190414 (-)
LOC110531356 LOC106578148 coding downstream 313843 5982772 ~ 6024749 (-)
LOC118966152 NA coding downstream 524717 5813423 ~ 5813875 (-)
LOC110511386 LOC106560508 coding downstream 1090970 5194243 ~ 5247622 (-)
LOC118936332 LOC106578081 coding upstream 1764 6340576 ~ 6351208 (-)
LOC118966221 NA coding upstream 1988 6340800 ~ 6340873 (-)
LOC118966228 NA coding upstream 3396 6342208 ~ 6342277 (-)
LOC118966211 NA coding upstream 4498 6343310 ~ 6343381 (-)
LOC110531397 NA coding upstream 19338 6358150 ~ 6365572 (-)
G766682 LOC106578097 non-coding downstream 4557 6330903 ~ 6334035 (-)
G766657 NA non-coding downstream 14721 6300638 ~ 6323871 (-)
G766658 NA non-coding downstream 17411 6320193 ~ 6321181 (-)
G766640 NA non-coding downstream 76437 6251597 ~ 6262155 (-)
G766688 NA non-coding upstream 217 6339029 ~ 6339646 (-)
G766665 NA non-coding upstream 1809 6340621 ~ 6365895 (-)
G766696 NA non-coding upstream 30903 6369715 ~ 6369926 (-)
G766697 NA non-coding upstream 31428 6370240 ~ 6370475 (-)
G766708 NA non-coding upstream 40835 6379647 ~ 6388310 (-)
G766599 LOC106578100 other downstream 129383 6201369 ~ 6209209 (-)
G765579 LOC101077030 other downstream 1040155 5297476 ~ 5298437 (-)
G765347 NA other downstream 1281270 5055480 ~ 5057322 (-)
LOC110515555 NA other downstream 1762720 4574163 ~ 4575872 (-)
G766749 NA other upstream 118391 6457203 ~ 6464631 (-)
G766850 LOC106578109 other upstream 273267 6612079 ~ 6613412 (-)
LOC110531366 LOC106578102 other upstream 534024 6851197 ~ 6882912 (-)
LOC110531380 LOC106578126 other upstream 626642 6963142 ~ 6969857 (-)

Expression



Co-expression Network