G766688



Basic Information


Item Value
gene id G766688
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 6339029 ~ 6339646 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU873006
TCACTACAATACCATACAGGAGaattgggatggagggagactgCAATACCATACTTCATCTGCTGGAGAGGCGCTGTGAACATGGATACATGGCTTCTACTATCTTAGTTGGAGAAAGGCACAGGACTATAGCATTCCTTAATGTTTTTTTGATTTCCCAAGGACAACTCCTGTTAAAATATAACTTATACATGACATTTCCTTTTTGTTGTCCGGTATTACTGCCAGATATTTTTTACTTGTCTCAGACGTCCGATGTTGATGTGGTTTGTCTTCGTCTGTAATCTGACAAGTGAAATTATTCGTAGGCCCAGTCATTCAGTGTGGTTTCAGAGGCTACAGGTCAGATTGTTAGCCtgcctgttcccagatctgtttatgctgTCAGGTCAACGACTCCTTGCCTTGCCAAACAGAATAGCACAAACAGGTCCGGGACCAGGCTAACACATTGTAGCTAAAGatttgttctacagtatatataggccTACGTCTAGCCATATACAATGTATAACTGTGGTGTATACTGTTAAGTTAATTACTTCTCATGTTTCGGTGAGCATTCATTGCTTTTCATTATATAGTGGGAAAGGAGTGCTCATCTCAATATGATCTCCT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU873006 True 618 lncRNA 0.41 1 6339029 6339646

Neighbor


gene id symbol gene type direction distance location
rcor2 rcor2 coding downstream 51878 6265331 ~ 6287151 (-)
exoc6b LOC106560516 coding downstream 148615 6066184 ~ 6190414 (-)
LOC110531356 LOC106578148 coding downstream 314280 5982772 ~ 6024749 (-)
LOC118966152 NA coding downstream 525154 5813423 ~ 5813875 (-)
LOC110511386 LOC106560508 coding downstream 1091407 5194243 ~ 5247622 (-)
LOC118936332 LOC106578081 coding upstream 930 6340576 ~ 6351208 (-)
LOC118966221 NA coding upstream 1154 6340800 ~ 6340873 (-)
LOC118966228 NA coding upstream 2562 6342208 ~ 6342277 (-)
LOC118966211 NA coding upstream 3664 6343310 ~ 6343381 (-)
LOC110531397 NA coding upstream 18504 6358150 ~ 6365572 (-)
G766687 NA non-coding downstream 217 6338592 ~ 6338812 (-)
G766682 LOC106578097 non-coding downstream 4994 6330903 ~ 6334035 (-)
G766657 NA non-coding downstream 15158 6300638 ~ 6323871 (-)
G766658 NA non-coding downstream 17848 6320193 ~ 6321181 (-)
G766665 NA non-coding upstream 975 6340621 ~ 6365895 (-)
G766696 NA non-coding upstream 30069 6369715 ~ 6369926 (-)
G766697 NA non-coding upstream 30594 6370240 ~ 6370475 (-)
G766708 NA non-coding upstream 40001 6379647 ~ 6388310 (-)
G766670 NA non-coding upstream 43499 6383145 ~ 6392089 (-)
G766640 NA other downstream 82401 6251597 ~ 6262155 (-)
G766599 LOC106578100 other downstream 129820 6201369 ~ 6209209 (-)
G765579 LOC101077030 other downstream 1040592 5297476 ~ 5298437 (-)
G765347 NA other downstream 1281707 5055480 ~ 5057322 (-)
LOC110515555 NA other downstream 1763157 4574163 ~ 4575872 (-)
G766749 NA other upstream 117557 6457203 ~ 6464631 (-)
G766850 LOC106578109 other upstream 272433 6612079 ~ 6613412 (-)
LOC110531366 LOC106578102 other upstream 533190 6851197 ~ 6882912 (-)
LOC110531380 LOC106578126 other upstream 625808 6963142 ~ 6969857 (-)

Expression



Co-expression Network