G766672



Basic Information


Item Value
gene id G766672
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 6391545 ~ 6400966 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU872984
AACAGATCAAGTGAAAGTTGATCCTACACACCTTGAGGTCGTGCAGCAACAGTTCTCCAGTGGCCAGGCTGGAACAGTTAGGACCTGGAAGGAACAGATCCCTAATTAAACATTATGCAGAAGTACATTAGGTACTGCAGACTATAAGCAGAGCATTCTGAAATGAGATCAGACTCAGGTTCAGTCATTGTAGCCATCCAGCCAGTGGTCCAAGGTCTGGCTACAAGCTCCCCACCCAGACACCCTCCCTCCAGGCAGGCAGCCCACCTTACCCCTGCCCCATGCACCGAGAGCAGGCTTGTCAGTGTCTGCCCAACCCACAG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU872984 True 323 lncRNA 0.52 2 6391545 6400966

Neighbor


gene id symbol gene type direction distance location
LOC110531397 NA coding downstream 25973 6358150 ~ 6365572 (-)
LOC118966206 NA coding downstream 28493 6362989 ~ 6363052 (-)
LOC118966209 NA coding downstream 28977 6362505 ~ 6362568 (-)
LOC118966212 NA coding downstream 29297 6362177 ~ 6362248 (-)
LOC118966234 NA coding downstream 29697 6361722 ~ 6361848 (-)
arl2 arl2 coding upstream 6556 6407522 ~ 6409568 (-)
gpha2 LOC106578061 coding upstream 80665 6481631 ~ 6490957 (-)
LOC110532903 LOC106578061 coding upstream 99796 6500762 ~ 6525335 (-)
badb LOC106578087 coding upstream 132197 6533163 ~ 6535751 (-)
LOC110510780 plcb3 coding upstream 283688 6636026 ~ 6834904 (-)
G766708 NA non-coding downstream 3235 6379647 ~ 6388310 (-)
G766697 NA non-coding downstream 21070 6370240 ~ 6370475 (-)
G766696 NA non-coding downstream 21619 6369715 ~ 6369926 (-)
G766665 NA non-coding downstream 25650 6340621 ~ 6365895 (-)
G766688 NA non-coding downstream 51899 6339029 ~ 6339646 (-)
G766720 NA non-coding upstream 1908 6402874 ~ 6403073 (-)
G766723 NA non-coding upstream 4025 6404991 ~ 6405266 (-)
G766707 NA non-coding upstream 5690 6406656 ~ 6407273 (-)
G766725 NA non-coding upstream 10085 6411051 ~ 6411291 (-)
G766732 LOC106578083 non-coding upstream 24228 6425194 ~ 6493655 (-)
G766640 NA other downstream 134917 6251597 ~ 6262155 (-)
G766599 LOC106578100 other downstream 182336 6201369 ~ 6209209 (-)
G765579 LOC101077030 other downstream 1093108 5297476 ~ 5298437 (-)
G765347 NA other downstream 1334223 5055480 ~ 5057322 (-)
G766749 NA other upstream 56237 6457203 ~ 6464631 (-)
G766850 LOC106578109 other upstream 211113 6612079 ~ 6613412 (-)
LOC110531366 LOC106578102 other upstream 471870 6851197 ~ 6882912 (-)
LOC110531380 LOC106578126 other upstream 564488 6963142 ~ 6969857 (-)
G767056 ovol1 other upstream 844678 7245644 ~ 7251075 (-)

Expression



Co-expression Network