G766850 (LOC106578109)


Basic Information

Item Value
gene id G766850
gene name LOC106578109
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 6612079 ~ 6613412 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU873212
CTCGAAGCACTGGTAGTGGGAGGGTTGAAACTCCATCCGGGTCGTGTGGGGGTCGTCTTCCTGCAGGTGGGGCTCCTGGCTGCTCACCACCTTCCTAGCCTGGTCAGCAGCATGCTTCTTCAGGATGTTGCCTGCTCCGATCATCATCCTGGTTGCCTGGATACGGTAGAACGCTCGGCTCTTCTGTTGCTGGACCAACACCTGGTAGTTGGCCATCTCTATAAGCTGCTCTGTGTCTCTATCAGGGTGTCTGGCTTTCAGCTCCTTCAGGGTCCTCGCCATGTCTCTCCTGGCCACGTCCTCCAGATCCCTCCTCCCTTCTTGTCCTCCGTCCTCCagcatccctccatccctccatccctccaccacctGTCCGTCCAGCTCCATCATGTCCATCTTAGTGAACCCACCTGGCCCcaacatccctcctcctcctcctcctcctcctcctcctcccatccctccgtCCATCCCTACCTCCGTCTCAACGATGATGCCTCTGTGCTTGTCGGCACGGTAACGCTTGCGGACGTACTTGTAGAAGAGCAATCGTCGATCGGCCACCCACGCCTGGACCACG

Function

NR:

description
sodium/calcium exchanger 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU873212 True 580 TUCP 0.59 3 6612079 6613412

Neighbor

gene id symbol gene type direction distance location
badb LOC106578087 coding downstream 76328 6533163 ~ 6535751 (-)
LOC110532903 LOC106578061 coding downstream 86744 6500762 ~ 6525335 (-)
gpha2 LOC106578061 coding downstream 121122 6481631 ~ 6490957 (-)
arl2 arl2 coding downstream 202511 6407522 ~ 6409568 (-)
LOC118966206 NA coding downstream 249027 6362989 ~ 6363052 (-)
LOC110510780 plcb3 coding upstream 71242 6636026 ~ 6834904 (-)
LOC110531366 LOC106578102 coding upstream 237785 6851197 ~ 6882912 (-)
LOC110531364 LOC106578119 coding upstream 272583 6885995 ~ 6907134 (-)
LOC118966154 NA coding upstream 341580 6954992 ~ 6957780 (-)
LOC110531380 LOC106578126 coding upstream 349730 6963142 ~ 6969857 (-)
G766701 NA non-coding downstream 78972 6530040 ~ 6533107 (-)
G766783 NA non-coding downstream 83400 6527877 ~ 6528679 (-)
G766768 NA non-coding downstream 107186 6504562 ~ 6504893 (-)
G766732 LOC106578083 non-coding downstream 118424 6425194 ~ 6493655 (-)
G766858 NA non-coding upstream 17027 6630439 ~ 6631134 (-)
G766870 NA non-coding upstream 55153 6668565 ~ 6668820 (-)
G766874 NA non-coding upstream 58198 6671610 ~ 6672837 (-)
G766832 NA non-coding upstream 69332 6682744 ~ 6728761 (-)
G766749 NA other downstream 147448 6457203 ~ 6464631 (-)
G766665 NA other downstream 246551 6340621 ~ 6365895 (-)
G766640 NA other downstream 355451 6251597 ~ 6262155 (-)
G766599 LOC106578100 other downstream 402870 6201369 ~ 6209209 (-)
G765579 LOC101077030 other downstream 1313642 5297476 ~ 5298437 (-)
G767056 ovol1 other upstream 632232 7245644 ~ 7251075 (-)
LOC110510419 LOC106560462 other upstream 1499176 8112588 ~ 8155916 (-)
G768390 NA other upstream 1576031 8189443 ~ 8191898 (-)

Expression


Co-expression Network