Item | Value |
---|---|
gene id | G766203 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048573.1 |
NCBI id | CM023227.2 |
chromosome length | 79455637 |
location | 6630232 ~ 6661760 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
unnamed protein product |
id | description |
---|
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU872358 | False | 1781 | lncRNA | 0.46 | 2 | 6630232 | 6659802 |
TU872369 | False | 1777 | lncRNA | 0.46 | 2 | 6630232 | 6659802 |
TU872356 | False | 2149 | lncRNA | 0.46 | 2 | 6645377 | 6659802 |
TU872370 | False | 948 | lncRNA | 0.37 | 4 | 6660110 | 6661760 |
TU872368 | False | 1159 | lncRNA | 0.40 | 3 | 6660411 | 6661760 |
TU872350 | False | 906 | lncRNA | 0.36 | 2 | 6660736 | 6661760 |
TU872351 | False | 987 | lncRNA | 0.34 | 2 | 6660736 | 6661760 |
TU872353 | False | 868 | lncRNA | 0.35 | 3 | 6660736 | 6661760 |
TU872361 | False | 985 | lncRNA | 0.34 | 2 | 6660736 | 6661760 |
TU872362 | False | 838 | lncRNA | 0.35 | 3 | 6660736 | 6661760 |
TU872363 | False | 991 | lncRNA | 0.34 | 2 | 6660736 | 6661760 |
TU872371 | True | 993 | lncRNA | 0.34 | 2 | 6660736 | 6661760 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
zgc:101765 | LOC106578084 | coding | upstream | 99571 | 6525266 ~ 6533092 (+) |
LOC110531404 | LOC106578062 | coding | upstream | 148883 | 6479369 ~ 6482626 (+) |
LOC118966153 | NA | coding | upstream | 156252 | 6473212 ~ 6473980 (+) |
ppp2r5b | ppp2r5b | coding | upstream | 157757 | 6429685 ~ 6472475 (+) |
batf2 | NA | coding | upstream | 202473 | 6419367 ~ 6427759 (+) |
LOC110531372 | LOC106578122 | coding | downstream | 258443 | 6920203 ~ 6941044 (+) |
LOC110531369 | LOC106578121 | coding | downstream | 322341 | 6984101 ~ 6989360 (+) |
LOC110531382 | LOC106578113 | coding | downstream | 419494 | 7081254 ~ 7124479 (+) |
LOC110532899 | LOC106578111 | coding | downstream | 488048 | 7149808 ~ 7188678 (+) |
ovol1a | ovol1 | coding | downstream | 566901 | 7228661 ~ 7248086 (+) |
G766241 | NA | non-coding | upstream | 14188 | 6615569 ~ 6616044 (+) |
G766217 | NA | non-coding | upstream | 58013 | 6571429 ~ 6572219 (+) |
G766153 | NA | non-coding | upstream | 154396 | 6474127 ~ 6475836 (+) |
G766168 | NA | non-coding | upstream | 166887 | 6459414 ~ 6463345 (+) |
G766167 | NA | non-coding | upstream | 172016 | 6457568 ~ 6458216 (+) |
G766255 | NA | non-coding | downstream | 1713 | 6663473 ~ 6667637 (+) |
G766258 | NA | non-coding | downstream | 9811 | 6671571 ~ 6672923 (+) |
G766259 | NA | non-coding | downstream | 25994 | 6687754 ~ 6689167 (+) |
G766260 | NA | non-coding | downstream | 27894 | 6689654 ~ 6694881 (+) |
G766262 | NA | non-coding | downstream | 35136 | 6696896 ~ 6697783 (+) |
G766152 | NA | other | upstream | 151436 | 6435762 ~ 6478796 (+) |
G766058 | NA | other | upstream | 268863 | 6340621 ~ 6361369 (+) |
mark2b | mark2 | other | upstream | 430259 | 6193381 ~ 6265279 (+) |
G766267 | NA | other | downstream | 57184 | 6718944 ~ 6723213 (+) |
G766375 | NA | other | downstream | 251909 | 6913669 ~ 6980155 (+) |
G766331 | NA | other | downstream | 280609 | 6942369 ~ 6943392 (+) |
G766410 | NA | other | downstream | 334422 | 6996182 ~ 6997020 (+) |