XLOC_026863


Basic Information

Item Value
gene id XLOC_026863
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 58472346 ~ 58476730 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00053160
GCCGGATTGCTTCCTCCAGTCCGTAGAGTTTCCCTTTAACCAAAAAGACGCCTGCCGTCCAGATGCTACAGTCCTCATGTATCCAGTGCTCCCCAGGCGCACCAGACTCCTCCAGACTCTCGCAGCCGTTCTCCTTCCTCCGTCGTTTGACTTGAGACCCACCGTCCTCTAAACTGTCCAACGAGTCCACGTCGCTGCAGTCGGGCTCTTGTTTTAAGGCCAGAGGAAGGCTGCTGTCAACCTTACAGACGGGGTGAGCTCCACTGCGATGGTACGGTCCATGTAAATCCCCAAGACCCTCAACATTCCCAGTACTTCCACACAGGCAGCAAAAACGCGTTTCCTGAAGCCTGGCGTCAGAGCCAATGCGACCCAGCTGTAGACAGGATGTCTTTGGGATGACCCCTGAGTCTGCAAGCTGGGAGCCTTTCTTTGAGGCCACCTCCTCCTCCCTAAAATTGACAATTGTGCAGGACGAGAACTCCATACGAATGTACGGCACGAAGCAGTGAACGGCAGTCCGAACCTCTTTCTTCTCGCTTTTGTGATTTGCAAATTTTAGTTTGATCTCCGGCTCTTTAGGAGAAAACATGGATGACGGTCCTGATGGCTGAGGTTTCCTCCGTCGTCTTTTCTTCGTCGTTTTGGGGCCTGGCGCCGCTCTCTTCGGCTGTTTCTTGGGTTTAGGTCTTGGTTTGGGTCTCGGTTTGGGCCTTGGTTTTGCCCGTTTCCTGCTTTTCGAAGGTGGAGTCCTTTCTTGATGGCTTGGCGTTGAAGATGATGATCTCCGATTCTCTGGAGACCTTAAGATGCTTGAGTTTTCTGCATCGGAGGTAGATGGGAAGTTTTTAGGGAAAGAAGAATTGGTGTCTTGTTCGCTGTCTTCCGGGGAAATGGGGATCAACACTGACTCCATCCAAGACAGCAGCGATTTGGATTCGGAGCCAACCCTATGGTTGGCGGTTTCAAAAACGGCTTCATCCATAGTGTAGACGCTGTTCACATTTTTGGGAGAGAAGTTCATTTGATGATCAGCATCAACCTGCTGCTTTAAGCGGGAACTTCTGAGCGTCCGGCCGCTTGTATCGCTGACTATAACACTTGTTGGTCGGGGACGCAAGTTTGGGCGGGTTGTGCATCTAGAGTTGCTTACTGGAACCTCAATGATGTCACTGTCGGCATCACTGGAGGTGCTCTCGGTAGATGTTTTTGTACATTCGGATGCGAGGGTTTCGATGGCGGTCTGCTCTGCTGCTGAGCTGGTGGAGTGAAGTGTGTTCGCAGCAGCACTGGAGTCCTGAGGTAAAAATGACGAGCCCTTAGAAAAAACTGTGTCACTCCCAATGTCTTGTGGATGTTTCTCTAATACGACGTGCGCTATCCTACCTCCTAGAATGCTGTTTTCCAGCACAGACTCTGCGTTCTTGTGACACTGTTTAGTTTGCAtcaacacctcctcctcctcttcttcctccatTTCCTCATGACAATCTGTAAACTCTTGGTCTGTGGATGAGCACTGGGACAGTATCTGTGCCACAGAGGGCATGCCATTGATTAGGGGTAAGGGGATGGAGTAGGAGTCATGGGCTGGTGTCTCTCCTGGCTCGGGACGATGGGGTGGAGTCTGTTCGATGTAGCAGGACTCTGACAGGTTGACACTCCTGCTTCCTGAGGTAAGGCCACACCAGCTAGGCTTCTTCACCAGATCCAGAGCCTCTATTGGGTTTGTATGCCTGCAGCCCACCGACAGATCCAGAGCTGAGGAACGAGAGTCCTGAAGGTGCATGACGTCAGCCTGGTCATGAGGGTCCATAACTGGAAAACAAAAGAATAGCGCGTCCCTTCACTGCCGCAACATGTTTCCAAAGGCAcggctattttaaaaatgaatctgGTCTAAAATCCTATAAAAGAGTAAAAGTACAGGCGACAGCAGGACAAGGCAGTTCCTCTGTTTAACTGAG

Function

GO:

id name namespace
GO:0030504 inorganic diphosphate transmembrane transporter activity molecular_function

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00053160 True 1967 lncRNA 0.51 2 58472346 58476730

Neighbor

gene id symbol gene type direction distance location
XLOC_026862 cdr2a coding downstream 17057 58430678 ~ 58455289 (-)
XLOC_026861 NA coding downstream 169089 58300220 ~ 58303257 (-)
XLOC_026860 NA coding downstream 175797 58292309 ~ 58296549 (-)
XLOC_026859 im:6904045 coding downstream 245763 58218661 ~ 58226583 (-)
XLOC_026858 CABZ01038493.1 coding downstream 255070 58210305 ~ 58217276 (-)
XLOC_026864 NA coding upstream 20541 58497271 ~ 58499028 (-)
XLOC_026865 unm_sa1261 coding upstream 29512 58506242 ~ 58543658 (-)
XLOC_026866 NA coding upstream 78573 58555303 ~ 58595731 (-)
XLOC_026867 NA coding upstream 80582 58557312 ~ 58559181 (-)
XLOC_026868 NA coding upstream 88429 58565159 ~ 58627544 (-)
XLOC_026854 NA non-coding downstream 362192 58108431 ~ 58110154 (-)
XLOC_026851 CT583687.2 non-coding downstream 412527 58057614 ~ 58059819 (-)
XLOC_026871 FP016018.3 non-coding upstream 177333 58654063 ~ 58673166 (-)

Expression


Co-expression Network