XLOC_026865 (unm_sa1261)



Basic Information


Item Value
gene id XLOC_026865
gene name unm_sa1261
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 58506242 ~ 58543658 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00052222
CCTGACTCCAGCGATCCATCGCTCTCTCCTCTGATTGGCCGCTGCTGGAAGAGCGGTGTCTCACTTTGCGCTCTGATTGGTTGATCTTTGCAGTGGGCTGTTCCAGCGCTCTCTCATTCTGCTCTCTAATTGGTCAATGTGGTTGTGGGCTGGGTCAGCGGTGTCATTACAGACCAACACAACCAACGGAGAGACAATAGAGGAACAGCAGAGGATCTGACAGCCGCTCACCCGCGGTGTGCACAGGAGTCAACAGCGTTTCATCCAGGCTCCGAGCAAAATAACAGACTGGACAGATGAAATTGTTGATGATGTCCGAATAATTCACTTTAATAAGCACTACGGAATGACAGTCAGGGATTGCGCATCATTTCTCCATTGAAAGATTTGTTACTCATCTCCATTGTTGTGTCTCTCTGGAACGATGAGCTCCTCGCCGCTCGTGTCCCGTTCCTCCAATGACATCCTGGAGGAGCTGCAGCTCATCACCGCCAAAAACCTGGAGAAGCTGGACTTCAATAAGTACTATGAGGTCATCCGGGAGCTCGGCAAAGGCACCTACGGCAAAGTGGACCTCGTCGTCCACAAGATCAGAGGCACAAAAATGGCTCTGAAGTTCTTGCGGAAGAAAACCACCAAGCTGAAGAGTTTCCTGCGCGAGTACAGCATCTCTCTCTACCTGTCACCCTGCCATTTCATCATCAACATGTACGGCATCGCCTTCGAGACTGACGAATACTACATTTTCGCTCAGGAGTACGCGCCGGCTGGAGATCTCTTTGACATCATTCCTCCCCAGGTGGGACTGCCGGAGAACGTTGCCAAGCGCTGCGTACACCAGGTGGCTATTGCACTGGATTACCTGCACTGCAAGAAGCTGGTGCATCGTGACATAAAGCCAGAGAACGTCCTGATCTTTGATAAGGAGTGCCGGAAGGTAAAGCTGTCAGACTTCGGGATGACAAGGCGAGCCGGTTCTCCAGTCAAACGAGTAAGCGGGACCATCCCATACACGGCACCAGAACTCTGTGACCCAGGCCGGCAGGAGGGTTTGTGTGTGGACTACAGCACTGATGTGTGGGCATTTGGCGTGCTTCTGTTCTGCATGCTCACCGGGAATTTCCCCTGGGAGAAAGCGCTGCCCTCGGATGCTTTCTACGAGGAGTTTGTGCGCTGGCAGCAGCGGAGGCGGCGCAGCAGTTCGGTGCCCTCACAATGGCGACGGTTCACTGAAGAGGCGCTCTGTATGTTTCGATGCCTGCTGTCCATCGAGCAGGACCGCCGATGCTCCGTCAAAGAGGTGTTTAGCTACTTTAACCACTGCTGGATGCTTGATACTGAGAACGGCAACACCACCCATATCTCAAGCAGTAACGGCAACAGTGGCACGGTGATGAACGGCCGCCAGGCTGAGCTCAGCTCTTCCTCCTCTGAGGAGGACGATCTGGTAGACCGCTTAAACAAGCAGAGCTTGTCGCCTGTGTGCGGGGTGACCAAAGGAGGCATCATCATGGAGCCAGTGACCACACACTACTCCTCAACATCCACAAACAGCCCTGCTTCCTCCACCGGAGGTTATGAGCGTGTGTCCCGTGACAATAACGGCAACAGTGGGCGCATTCTAGTCACGACACCAATCGAAATATGCGTGTAG

Function


symbol description
unm_sa1261 Predicted to enable ATP binding activity; protein serine kinase activity; and protein threonine kinase activity. Predicted to act upstream of or within protein phosphorylation. Predicted to be located in cytoplasm. Orthologous to human SBK1 (SH3 domain binding kinase 1).

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0016310 phosphorylation biological_process
GO:0005737 cytoplasm cellular_component
GO:0016740 transferase activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function
GO:0016301 kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-120411-10 Predicted to enable ATP binding activity; protein serine kinase activity; and protein threonine kinase activity. Predicted to act upstream of or within protein phosphorylation. Predicted to be located in cytoplasm. Orthologous to human SBK1 (SH3 domain binding kinase 1).

Ensembl:

ensembl_id ENSDARG00000031618

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00052222 True 1654 mRNA 0.54 4 58506242 58543658

Neighbor


gene id symbol gene type direction distance location
XLOC_026864 NA coding downstream 7214 58497271 ~ 58499028 (-)
XLOC_026863 NA coding downstream 29512 58472346 ~ 58476730 (-)
XLOC_026862 cdr2a coding downstream 50953 58430678 ~ 58455289 (-)
XLOC_026861 NA coding downstream 202985 58300220 ~ 58303257 (-)
XLOC_026860 NA coding downstream 209693 58292309 ~ 58296549 (-)
XLOC_026866 NA coding upstream 11645 58555303 ~ 58595731 (-)
XLOC_026867 NA coding upstream 13654 58557312 ~ 58559181 (-)
XLOC_026868 NA coding upstream 21501 58565159 ~ 58627544 (-)
XLOC_026869 CABZ01038524.1 coding upstream 64511 58608169 ~ 58617819 (-)
XLOC_026870 dhrs7ca coding upstream 90034 58633692 ~ 58650057 (-)
XLOC_026858 CABZ01038493.1 non-coding downstream 288966 58210305 ~ 58217276 (-)
XLOC_026871 FP016018.3 non-coding upstream 110405 58654063 ~ 58673166 (-)
XLOC_026872 CU571382.3 non-coding upstream 116098 58659756 ~ 58661120 (-)

Expression



Co-expression Network


Homologous


species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000112_02060950_02068272 UNM_SA1261 coding CI01000112 null 2060721 ~ 2068604 (+)