G766959


Basic Information

Item Value
gene id G766959
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 6976663 ~ 6978236 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU873360
tctgtgtgtagagtaaaggggatccagaagtagcatctctgtgtgtagagtaaaggggatccagaagtagcatctctgtgtgtagagtaaaggggatccagaagtagcatctctgtgtgtagagtaaaggggaTCCAGAAGTAgcttctctgtgtgtagagtaaaggtggtccagaagtagcatctctgtgtgtagagtaaaggtggtccagaagtagcttctctgtgtgtagagtaaaggtggtccagaagtagcttctctgtgtgtagagtaaaggtggtccagaagtagcatctctgtgtgtagagtaaaggtggtccagaagtagcatctctgtgtgtagagtaaaggggatccagaagtagcatctctgtgtgtagagtaaaggggatccagaagtagcatctctgtgtgtagagtaaaggggatccagaagtagcatctctgtgtgtagagtaaaggg
>TU873350
tctgtgtgtagagtaaaggggatccagaagtagcatctctgtgtgtagagtaaaggggatccagaagtagcatctctgtgtgtagagtaaaggggatccagaagtagcatctctgtgtgtagagtaaaggggaTCCAGAAGTAgcttctctgtgtgtagagtaaaggtggtccagaagtagcatctctgtgtgtagagtaaaggggaTCCAGAAGTAgcttctctgtgtgtagagtaaaggggatccagaagtagcatctctgtgtgtagagtaaaggggatccagaagtagcatctctgtgtgtagagtaaaggggatccagaagtagcatctctgtgtgtagagtaaagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU873360 False 464 lncRNA 0.46 2 6976663 6978236
TU873350 True 352 lncRNA 0.46 2 6977367 6978236

Neighbor

gene id symbol gene type direction distance location
LOC110531380 LOC106578126 coding downstream 6806 6963142 ~ 6969857 (-)
LOC118966154 NA coding downstream 18883 6954992 ~ 6957780 (-)
LOC110531364 LOC106578119 coding downstream 69529 6885995 ~ 6907134 (-)
LOC110531366 LOC106578102 coding downstream 93751 6851197 ~ 6882912 (-)
LOC110510780 plcb3 coding downstream 141759 6636026 ~ 6834904 (-)
LOC110531378 LOC106578114 coding upstream 76599 7054835 ~ 7065193 (-)
LOC110531373 LOC106578114 coding upstream 90291 7068527 ~ 7071119 (-)
LOC118966172 NA coding upstream 93721 7071957 ~ 7074751 (-)
tmem179ba t179b coding upstream 382673 7360909 ~ 7379032 (-)
prox3 LOC106578142 coding upstream 405113 7383349 ~ 7390543 (-)
G766944 NA non-coding downstream 43993 6931604 ~ 6932670 (-)
G766915 NA non-coding downstream 121038 6854776 ~ 6855625 (-)
G766903 NA non-coding downstream 156266 6817979 ~ 6820397 (-)
G766904 NA non-coding downstream 156774 6818396 ~ 6819889 (-)
G766899 NA non-coding downstream 173713 6794779 ~ 6802950 (-)
G766961 NA non-coding upstream 3753 6981989 ~ 6982190 (-)
G766964 NA non-coding upstream 5904 6984140 ~ 6984399 (-)
G766965 LOC106578116 non-coding upstream 6436 6984672 ~ 6985349 (-)
G766966 NA non-coding upstream 7146 6985382 ~ 6985642 (-)
G766967 LOC106578121 non-coding upstream 7874 6986110 ~ 6988485 (-)
G766850 LOC106578109 other downstream 363251 6612079 ~ 6613412 (-)
G766749 NA other downstream 512032 6457203 ~ 6464631 (-)
G766665 NA other downstream 611135 6340621 ~ 6365895 (-)
G767056 ovol1 other upstream 267408 7245644 ~ 7251075 (-)
LOC110510419 LOC106560462 other upstream 1134352 8112588 ~ 8155916 (-)
G768390 NA other upstream 1211207 8189443 ~ 8191898 (-)
LOC118936684 LOC106578100 other upstream 1243295 8221531 ~ 8253809 (-)
LOC110531377 LOC106578102 other upstream 1300581 8277882 ~ 8283359 (-)

Expression


Co-expression Network