Gene
RNA
| Item | Value |
|---|---|
| gene id | G766965 |
| gene name | LOC106578116 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 6984672 ~ 6985349 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| zinc finger protein 135-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU873380 | True | 678 | lncRNA | 0.44 | 1 | 6984672 | 6985349 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110531380 | LOC106578126 | coding | downstream | 14815 | 6963142 ~ 6969857 (-) |
| LOC118966154 | NA | coding | downstream | 26892 | 6954992 ~ 6957780 (-) |
| LOC110531364 | LOC106578119 | coding | downstream | 77538 | 6885995 ~ 6907134 (-) |
| LOC110531366 | LOC106578102 | coding | downstream | 101760 | 6851197 ~ 6882912 (-) |
| LOC110510780 | plcb3 | coding | downstream | 149768 | 6636026 ~ 6834904 (-) |
| LOC110531378 | LOC106578114 | coding | upstream | 69486 | 7054835 ~ 7065193 (-) |
| LOC110531373 | LOC106578114 | coding | upstream | 83178 | 7068527 ~ 7071119 (-) |
| LOC118966172 | NA | coding | upstream | 86608 | 7071957 ~ 7074751 (-) |
| tmem179ba | t179b | coding | upstream | 375560 | 7360909 ~ 7379032 (-) |
| prox3 | LOC106578142 | coding | upstream | 398000 | 7383349 ~ 7390543 (-) |
| G766964 | NA | non-coding | downstream | 273 | 6984140 ~ 6984399 (-) |
| G766961 | NA | non-coding | downstream | 2482 | 6981989 ~ 6982190 (-) |
| G766959 | NA | non-coding | downstream | 6436 | 6976663 ~ 6978236 (-) |
| G766944 | NA | non-coding | downstream | 52002 | 6931604 ~ 6932670 (-) |
| G766915 | NA | non-coding | downstream | 129047 | 6854776 ~ 6855625 (-) |
| G766966 | NA | non-coding | upstream | 33 | 6985382 ~ 6985642 (-) |
| G766967 | LOC106578121 | non-coding | upstream | 761 | 6986110 ~ 6988485 (-) |
| G766970 | NA | non-coding | upstream | 12720 | 6998069 ~ 6998625 (-) |
| G766820 | LOC106578118 | non-coding | upstream | 14995 | 7000344 ~ 7001765 (-) |
| LOC110531367 | LOC106578116 | non-coding | upstream | 18853 | 6970858 ~ 7054255 (-) |
| G766850 | LOC106578109 | other | downstream | 371260 | 6612079 ~ 6613412 (-) |
| G766749 | NA | other | downstream | 520041 | 6457203 ~ 6464631 (-) |
| G766665 | NA | other | downstream | 619144 | 6340621 ~ 6365895 (-) |
| G767056 | ovol1 | other | upstream | 260295 | 7245644 ~ 7251075 (-) |
| LOC110510419 | LOC106560462 | other | upstream | 1127239 | 8112588 ~ 8155916 (-) |
| G768390 | NA | other | upstream | 1204094 | 8189443 ~ 8191898 (-) |
| LOC118936684 | LOC106578100 | other | upstream | 1236182 | 8221531 ~ 8253809 (-) |
| LOC110531377 | LOC106578102 | other | upstream | 1293468 | 8277882 ~ 8283359 (-) |
