G767012 (LOC105030512)


Basic Information

Item Value
gene id G767012
gene name LOC105030512
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 7129328 ~ 7129866 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU873452
gctacagggagacaggacgtacagctgatcgtcctcgcagtggcagaccacgtgtaacaacacctgcacaggatcggtacatccgaacatcacacctgcaggacaggtacaggatggcaacaacaactgcccgagttacaccaggaacgcacaacccctccatcagtgctcagactgtccgaaaataggctgagagaggatggactgagggcttgtaggcctgttgtaaggcaggtcctcaccagacatcaccggcaacaacgtcgcctatgggcacaaacccaccgtcgctggaccagacaggactggcaaaaagtgctcttcactgacgagttgcggttttgtctcaccagaggtgatggttggatttgcgtttattgtcgaaggaatgagcgttacaccgaggcctgtactctggagcgggatcgatttggaggtggagggtccgtcatggtctggggcggtgtgttacagcatcatcggactgagcttgttgtcattgcaggcaatctcaacgctgtgcgttacagggaagacat

Function

NR:

description
uncharacterized protein LOC110509366

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU873452 True 539 lncRNA 0.55 1 7129328 7129866

Neighbor

gene id symbol gene type direction distance location
LOC118966172 NA coding downstream 54577 7071957 ~ 7074751 (-)
LOC110531373 LOC106578114 coding downstream 58209 7068527 ~ 7071119 (-)
LOC110531378 LOC106578114 coding downstream 64135 7054835 ~ 7065193 (-)
LOC110531367 LOC106578116 coding downstream 75073 6970858 ~ 7054255 (-)
LOC110531380 LOC106578126 coding downstream 159471 6963142 ~ 6969857 (-)
tmem179ba t179b coding upstream 231043 7360909 ~ 7379032 (-)
prox3 LOC106578142 coding upstream 253483 7383349 ~ 7390543 (-)
snx15 snx15 coding upstream 277427 7407293 ~ 7426803 (-)
LOC110515519 LOC106578133 coding upstream 675635 7805501 ~ 7873725 (-)
LOC118965986 NA coding upstream 930718 8060584 ~ 8061856 (-)
G767010 NA non-coding downstream 2348 7126751 ~ 7126980 (-)
G767003 NA non-coding downstream 19720 7109363 ~ 7109608 (-)
G767002 NA non-coding downstream 22053 7107076 ~ 7107275 (-)
G766996 NA non-coding downstream 46630 7081927 ~ 7082698 (-)
G767017 NA non-coding upstream 6632 7136498 ~ 7137266 (-)
G767020 NA non-coding upstream 15724 7145590 ~ 7145877 (-)
G767034 NA non-coding upstream 58424 7188290 ~ 7216594 (-)
G767001 NA non-coding upstream 76549 7206415 ~ 7207484 (-)
G767047 NA non-coding upstream 87179 7217045 ~ 7217371 (-)
LOC110531366 LOC106578102 other downstream 247210 6851197 ~ 6882912 (-)
G766850 LOC106578109 other downstream 515916 6612079 ~ 6613412 (-)
G766749 NA other downstream 664697 6457203 ~ 6464631 (-)
G766665 NA other downstream 763800 6340621 ~ 6365895 (-)
G767056 ovol1 other upstream 115778 7245644 ~ 7251075 (-)
LOC110510419 LOC106560462 other upstream 982722 8112588 ~ 8155916 (-)
G768390 NA other upstream 1059577 8189443 ~ 8191898 (-)
LOC118936684 LOC106578100 other upstream 1091665 8221531 ~ 8253809 (-)
LOC110531377 LOC106578102 other upstream 1148951 8277882 ~ 8283359 (-)

Expression


Co-expression Network