G767034


Basic Information

Item Value
gene id G767034
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 7188290 ~ 7216594 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU873480
aaagtttagagggacggccaggtcttggtagatttgcagtggtctgatactccttccatttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatcgtttttgtatccaaatccggctttaaacttcttcacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcgcttttaacggacctctgagactatcacagtgcaggtgcatttgtatggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggctgaataattttgcacgcccaattttccagtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttccacttcacgattgtgtcccacttgttgttgattcttcacaaaaaaatacagttttatatctttatgtttgaaggcagaaatgtggcaaaaggtcgcaaagttcaagggggccaaatactttcgcaaggcactgtatctaatgTCGGAAAATTCTAAacagaaacatatctaaatcaggcaacaacaacaacaacaaaaatatagtcAAAAACAATTTGTTCCCCCTATCTGTAGCCCAAAGCACATTTTTCTATATTAGTGGGTTAGAGTCAGGGGCCTCAGATGTTCACTTCATCACAATCATTGGGTTGTAGTGGATGGGTGTCCATGAGCAGTACTGGAGTGATGACGAGGGCTCCGTCGTTCTTGCCTGACTTGTTGGTGCAGGGACTGAAGAACGGGAACACGGACTCACAGAAGGAGGCCAGGAAGGTGTAGATGTGTAGCTTAGCGT
>TU873481
acagttttatatctttatgtttgaagcctgaaatgtggcaaaaggtcgcaaagttcaagggggccaaatactttcgcaaggcactgtatctaatgTCGGAAAATTCTAAacagaaacatatctaaatcaggcaacaacaacaacaacaaaaatatagtcAAAAACAATTTGTTCCCCCTATCTGTAGCCCAAAGCACATTTTTCTATATTAGTGGGTTAGAGTCAGGGGCCTCAGATGTTCACTTCATCACAATCATTGGGTTGTAGTGGATGGGTGTCCATGAGCAGTACTGGAGTGATGACGAGGGCTCCGTCGTTCTTGCCTGACTTGTTGGTGCAGGGACTGAAGAACGGGAACACGGACTCACAGAAGGAGGCCAGGAAGGTGTAGATGTGTAGCTTAGCGT

Function

NR:

description
PREDICTED: E3 ubiquitin-protein ligase TRIM39-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU873480 False 903 lncRNA 0.42 2 7188290 7189222
TU873481 True 407 lncRNA 0.44 3 7188290 7216594

Neighbor

gene id symbol gene type direction distance location
LOC118966172 NA coding downstream 113539 7071957 ~ 7074751 (-)
LOC110531373 LOC106578114 coding downstream 117171 7068527 ~ 7071119 (-)
LOC110531378 LOC106578114 coding downstream 123097 7054835 ~ 7065193 (-)
LOC110531367 LOC106578116 coding downstream 134035 6970858 ~ 7054255 (-)
LOC110531380 LOC106578126 coding downstream 218433 6963142 ~ 6969857 (-)
tmem179ba t179b coding upstream 144315 7360909 ~ 7379032 (-)
prox3 LOC106578142 coding upstream 166755 7383349 ~ 7390543 (-)
snx15 snx15 coding upstream 190699 7407293 ~ 7426803 (-)
LOC110515519 LOC106578133 coding upstream 588907 7805501 ~ 7873725 (-)
LOC118965986 NA coding upstream 843990 8060584 ~ 8061856 (-)
G767020 NA non-coding downstream 42413 7145590 ~ 7145877 (-)
G767017 NA non-coding downstream 51024 7136498 ~ 7137266 (-)
G767012 LOC105030512 non-coding downstream 58424 7129328 ~ 7129866 (-)
G767010 NA non-coding downstream 61310 7126751 ~ 7126980 (-)
G767003 NA non-coding downstream 78682 7109363 ~ 7109608 (-)
G767047 NA non-coding upstream 451 7217045 ~ 7217371 (-)
G767434 NA non-coding upstream 64326 7280920 ~ 7281236 (-)
G767445 NA non-coding upstream 79077 7295671 ~ 7296059 (-)
G767461 LOC106583515 non-coding upstream 112306 7328900 ~ 7332927 (-)
G767460 NA non-coding upstream 120156 7336750 ~ 7337789 (-)
LOC110531366 LOC106578102 other downstream 306172 6851197 ~ 6882912 (-)
G766850 LOC106578109 other downstream 574878 6612079 ~ 6613412 (-)
G766749 NA other downstream 723659 6457203 ~ 6464631 (-)
G766665 NA other downstream 822762 6340621 ~ 6365895 (-)
G767056 ovol1 other upstream 29050 7245644 ~ 7251075 (-)
LOC110510419 LOC106560462 other upstream 895994 8112588 ~ 8155916 (-)
G768390 NA other upstream 972849 8189443 ~ 8191898 (-)
LOC118936684 LOC106578100 other upstream 1004937 8221531 ~ 8253809 (-)
LOC110531377 LOC106578102 other upstream 1062223 8277882 ~ 8283359 (-)

Expression


Co-expression Network