G767662


Basic Information

Item Value
gene id G767662
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 7856364 ~ 7861235 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU874329
gatagagaaagagaggttaggtTGGGGACAGATAGCATGATGAAGAAAGCGAGGTTAGATTGGGGACAGATAgcatgatggagaaagagagaaagagagattagaTTGGGGACATATAGCATGatggagaaagagataaagagaggttaggttggggacagatagcatgatggagagagagagagagagaggttagtttggggacagatagcatgatggagaaagagagaaagagaggttaggttggggacagatagcatgatggagagagagagatgttaggttGGGGACAGATAGGGTACcagtcctggtctatagtagtgcactatataagtaATATGGTGCaatccctggtctaaagtagtgcactatatagggaatagcatgccagccctggtctaaagtagtgcactatataggga
>TU874332
gaaagagagagagagaggttaggtcggggacagatagcatgatagagaaagagaggttaggttggggacagatagcatgatgagaaagagagtttaggttggggacagataacatgatagagaaagagagaaagagaggttaggttggggacagatagcatgatggagagagagagatgttaggttGGGGACAGATAGGGTACcagtcctggtctatagtagtgcactatataagtaATATGGTGCaatccctggtctaaagtagtgcactatatagggaatagcatgccagccctggtctaaagtagtgcactatataggga
>TU874330
agcatgatgagaaagagagagagagagcttaggTTGGGGAGAGATAgcatgatggagaaagagaggttaggTTGGGTACAGATAgcatgatggagaaagagagaaagagaggttaggtTGGGGACATATAgcatgatggagaaagagaggttaggttggggacagatagcatgatgagaaagagagaaagagaggttaggttggggacagatagcatgat
>TU874331
GGGACATATAgcatgatggagaaagagagaaagagaggttaggttggggacagatagcatgatggagaaagagagagagagaggttaggttggggacagatagcatgatggagaaagagaggttagaTTGGGGACTGGTAGCATGATGGAGAAAGAGTGAGGTTAGgTTGGGGAGAGATAgcatgatggagaaagagagaaagagaggttaagttggggacagatagcatgatgagaaagagagagagagagcttaggTTGGGGAGAGATAgcatgatggagaaagagaggttaggTTGGGTACAGATAgcatgatggagaaagagagaaagagaggttaggtTGGGGACATATAgcatgatggagaaagagaggttaggttggggacagatagcatgatgagaaagagagaaagagaggttaggttggggacagatagcatgat
>TU874333
gagaggttaggttggggacagatagcatgatagagaaagagagaaagagaggttagtttggggacagatagcatgatggagaaagagaggttagaTTGGGGACTTATAgcatgatggagaaagagagaggttaggTTGGGGAGAGATAgcatgatggagaaagagagaaagagaggttaagttggggacagatagcatgatgagaaagagagagagagagcttaggTTGGGGAGAGATAgcatgatggagaaagagaggttaggTTGGGTACAGATAgcatgatggagaaagagagaaagagaggttaggtTGGGGACATATAgcatgatggagaaagagaggttaggttggggacagatagcatgatgagaaagagagaaagagaggttaggttggggacagatagcatgat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU874329 False 422 lncRNA 0.44 2 7856364 7857596
TU874332 False 323 lncRNA 0.45 2 7856364 7856724
TU874330 False 220 lncRNA 0.45 2 7857044 7859977
TU874331 False 445 lncRNA 0.46 2 7857044 7860202
TU874333 True 413 lncRNA 0.45 2 7857044 7861235

Neighbor

gene id symbol gene type direction distance location
snx15 snx15 coding downstream 429561 7407293 ~ 7426803 (-)
prox3 LOC106578142 coding downstream 465821 7383349 ~ 7390543 (-)
tmem179ba t179b coding downstream 477332 7360909 ~ 7379032 (-)
LOC118966172 NA coding downstream 781613 7071957 ~ 7074751 (-)
LOC110531373 LOC106578114 coding downstream 785245 7068527 ~ 7071119 (-)
LOC118965986 NA coding upstream 199349 8060584 ~ 8061856 (-)
LOC118965984 NA coding upstream 200991 8062226 ~ 8064024 (-)
LOC118965983 NA coding upstream 205065 8066300 ~ 8067723 (-)
LOC118965985 NA coding upstream 206592 8067827 ~ 8069224 (-)
brms1 LOC106560445 coding upstream 222377 8083612 ~ 8110566 (-)
G767654 NA non-coding downstream 5819 7850126 ~ 7850545 (-)
G767651 NA non-coding downstream 25020 7830257 ~ 7831344 (-)
G767625 NA non-coding downstream 53449 7799881 ~ 7802915 (-)
G767636 NA non-coding downstream 67060 7787820 ~ 7789304 (-)
G767635 NA non-coding downstream 76188 7779800 ~ 7780176 (-)
LOC110515519 LOC106578133 non-coding upstream 6542 7805501 ~ 7873725 (-)
G767685 NA non-coding upstream 53907 7915142 ~ 7915930 (-)
G767702 NA non-coding upstream 82158 7943393 ~ 7943641 (-)
G767706 LOC106560439 non-coding upstream 93942 7955177 ~ 8007488 (-)
G767710 NA non-coding upstream 101718 7962953 ~ 8009376 (-)
G767056 ovol1 other downstream 605289 7245644 ~ 7251075 (-)
LOC110531380 LOC106578126 other downstream 886673 6963142 ~ 6969857 (-)
LOC110531366 LOC106578102 other downstream 974246 6851197 ~ 6882912 (-)
G766850 LOC106578109 other downstream 1242952 6612079 ~ 6613412 (-)
G766749 NA other downstream 1391733 6457203 ~ 6464631 (-)
LOC110510419 LOC106560462 other upstream 251353 8112588 ~ 8155916 (-)
G768390 NA other upstream 328208 8189443 ~ 8191898 (-)
LOC118936684 LOC106578100 other upstream 360296 8221531 ~ 8253809 (-)
LOC110531377 LOC106578102 other upstream 417582 8277882 ~ 8283359 (-)
G768780 NA other upstream 1121233 8982468 ~ 8990706 (-)

Expression


Co-expression Network