G767710


Basic Information

Item Value
gene id G767710
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 7962953 ~ 8009376 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU874394
GTTTGgattaactttatttaactttatttaaaatacattacaattatttatttattttatttactttatttaaaTGAACATACAGGACAAAATCACCAATCATTAGTTGTTAAcacagttgttgttttgtgtaTTTTGTAATAATGCAAGTTAACATTACAAGCTCATTAACTAAAGTTCAGATATAAAtgtgtagtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtgtctgtgtctgtgtctgtgtctgtctctg
>TU874396
GTTTGgattaactttatttaactttatttaaaatacattacaattatttatttattttatttactttatttaaaTGAACATACAGGACAAAATCACCAATCATTAGTTGTTAAcacagttgttgttttgtgtaTTTTGTAATAATGCAAGTTAACATTACAAGCTCATTAACTAAAGTTCAGATATAAAtgtgtagtgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtatgtctgtctgtgtgtgtgtgtgagagacttggtgtgtatatatatctggACAGGTTTAACTATATTTCTGTCAACATCCAGTTCAGATCAGTAGGAAATGCCCTTTTTACCAAAAACAACACCAGATTTTATGCATTTTCTTTCTCACTCTGTTGTCAAAATACTAAAAACAAATCAAAGATCATCATCCCATATTCTTcattcttatttattttattcaatTGTGCTATTGTCTATAAGGCAGTTTGTTATAATAGAGAAAGAACATATGACTTTAAGATAGATACAATATAGAGATGAATAGATATTACACCCATGATCATGGATGAgggagggagggagggagacagggagggaggcagg
>TU874395
GTTTGgattaactttatttaactttatttaaaatacattacaattatttatttattttatttactttatttaaaTGAACATACAGGACAAAATCACCAATCATTAGTTGTTAAcacagttgttgttttgtgtaTTTTGTAATAATGCAAGTTAACATTACAAGCTCATTAACTAAAGTTCAGATATAAAtgtgtagtgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtatgtctgtctgtgtgtgtgtgtgagagacttggtgtgtatatatatctggACAGGTTTAACTATATTTCTGTCAACATCCAGTTCAGATCAGTAGGAAATGCCCTTTTTACCAAAAACAACACCAGATTTTATGCATTTTCTTTCTCACTCTGTTGTCAAAATACTAAAAACAAATCAAAGATCATCATCCCATATTCTTcattcttatttattttattcaatTGTGCTATTGTCTATAAGGCAGTTTGTTATAATAGAGAAAGAACATATGACTTTAAGATAGATACAATATAGAGATGAATAGATATTACACCCATGATCATGGATGACTTTaccaaggaaagagagagagagggaggtagggagggaggcagggagggagggagggagacag

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU874394 False 290 lncRNA 0.31 3 7962953 8009376
TU874396 False 619 lncRNA 0.32 3 8008403 8009376
TU874395 True 650 lncRNA 0.33 2 8008487 8009376

Neighbor

gene id symbol gene type direction distance location
LOC110515519 LOC106578133 coding downstream 89228 7805501 ~ 7873725 (-)
snx15 snx15 coding downstream 536150 7407293 ~ 7426803 (-)
prox3 LOC106578142 coding downstream 572410 7383349 ~ 7390543 (-)
tmem179ba t179b coding downstream 583921 7360909 ~ 7379032 (-)
LOC118966172 NA coding downstream 888202 7071957 ~ 7074751 (-)
LOC118965986 NA coding upstream 51208 8060584 ~ 8061856 (-)
LOC118965984 NA coding upstream 52850 8062226 ~ 8064024 (-)
LOC118965983 NA coding upstream 56924 8066300 ~ 8067723 (-)
LOC118965985 NA coding upstream 58451 8067827 ~ 8069224 (-)
brms1 LOC106560445 coding upstream 74236 8083612 ~ 8110566 (-)
G767702 NA non-coding downstream 19312 7943393 ~ 7943641 (-)
G767685 NA non-coding downstream 47023 7915142 ~ 7915930 (-)
G767663 NA non-coding downstream 101991 7858667 ~ 7860962 (-)
G767734 NA non-coding upstream 12084 8021460 ~ 8021988 (-)
G767735 NA non-coding upstream 14239 8023615 ~ 8023869 (-)
G767755 NA non-coding upstream 22417 8031793 ~ 8032024 (-)
G767756 NA non-coding upstream 22822 8032198 ~ 8032555 (-)
G767757 NA non-coding upstream 25259 8034635 ~ 8035162 (-)
G767056 ovol1 other downstream 711878 7245644 ~ 7251075 (-)
LOC110531380 LOC106578126 other downstream 993262 6963142 ~ 6969857 (-)
LOC110531366 LOC106578102 other downstream 1080835 6851197 ~ 6882912 (-)
G766850 LOC106578109 other downstream 1349541 6612079 ~ 6613412 (-)
G766749 NA other downstream 1498322 6457203 ~ 6464631 (-)
LOC110510419 LOC106560462 other upstream 103212 8112588 ~ 8155916 (-)
G768390 NA other upstream 180067 8189443 ~ 8191898 (-)
LOC118936684 LOC106578100 other upstream 212155 8221531 ~ 8253809 (-)
LOC110531377 LOC106578102 other upstream 269441 8277882 ~ 8283359 (-)
G768780 NA other upstream 973092 8982468 ~ 8990706 (-)

Expression


Co-expression Network