G768651


Basic Information

Item Value
gene id G768651
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 8728516 ~ 8730832 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU875572
ggaggctatatacaggtggtaccggtacagagtcaatgtggaggctatatacagggggtaccagtacagagtcaatgtggaggctatatacaggtggtaccagtacagagtcaatgtggaggctatatacagggggtaccggtacagagtcaatgtggaggctatatacaggggtaccggtacagagtcaatgtggaggctatatacagg
>TU875570
ggaggctatatacaggtggtaccggtacagagtcaatgtggaggctatatacagggggtaccagtacagagtcaatgtggaggctatatacagggggtaccggtacagagtcagtgtggaggctatatacaggtggtaccagtacagagtcaatgtggagactatatacaggtggtaccagtacagagtcaatgtggaggctatatacaggtggtaccagtacagagtcaatgtggaggctatatacaggtggtacc
>TU875573
ggaggctatatacaggtggtaccggtacagagtcaatgtggaggctatatacagggggtaccagtacagagtcaatgtggaggctatatacagggggtaccagtacagagtcaatgtggaggctatatacagggggtaccagtacagagtcaatgtggagactatatacaggtggtaccagtacagagtccatgtggaggatatatacaggtggtaccagtacagagtcaatgtggaggctatatacaggtggtaccagtacagagtcaatgtggaggctatatacaggtggtaccagtacagagtcaatgtggag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU875572 False 210 lncRNA 0.49 3 8728516 8730832
TU875570 False 257 lncRNA 0.48 2 8729408 8730832
TU875573 True 316 lncRNA 0.47 2 8729817 8730832

Neighbor

gene id symbol gene type direction distance location
LOC118966157 NA coding downstream 11178 8702038 ~ 8717338 (-)
LOC110532904 m1ap coding downstream 43545 8639499 ~ 8684971 (-)
nagk nagk coding downstream 147940 8566556 ~ 8580576 (-)
hspa12b LOC106578073 coding downstream 194803 8489987 ~ 8533713 (-)
LOC118966156 NA coding downstream 196098 8530635 ~ 8533005 (-)
phka1a LOC106578056 coding upstream 292881 9023713 ~ 9077363 (-)
leap2 leap-2a coding upstream 352544 9083247 ~ 9145704 (-)
bmp15 LOC106578107 coding upstream 373402 9104234 ~ 9107459 (-)
LOC110531417 LOC106578044 coding upstream 563932 9294764 ~ 9348258 (-)
LOC110531429 LOC106578053 coding upstream 1252660 9983492 ~ 9988450 (-)
G768610 NA non-coding downstream 2483 8630616 ~ 8726033 (-)
G768611 NA non-coding downstream 90127 8637933 ~ 8638389 (-)
G768591 NA non-coding downstream 152523 8575666 ~ 8575993 (-)
G768528 NA non-coding downstream 227214 8459835 ~ 8501302 (-)
G768662 NA non-coding upstream 18982 8749814 ~ 8751739 (-)
G768672 NA non-coding upstream 36547 8767379 ~ 8767685 (-)
G768673 NA non-coding upstream 38022 8768854 ~ 8769062 (-)
G768674 NA non-coding upstream 39066 8769898 ~ 8770167 (-)
G768675 NA non-coding upstream 43781 8774613 ~ 8775013 (-)
LOC110531377 LOC106578102 other downstream 445192 8277882 ~ 8283359 (-)
LOC118936684 LOC106578100 other downstream 475761 8221531 ~ 8253809 (-)
G768390 NA other downstream 536618 8189443 ~ 8191898 (-)
LOC110510419 LOC106560462 other downstream 614446 8112588 ~ 8155916 (-)
G767056 ovol1 other downstream 1477441 7245644 ~ 7251075 (-)
G768780 NA other upstream 251636 8982468 ~ 8990706 (-)
G770225 NA other upstream 1643877 10367459 ~ 10375854 (-)
G770549 NA other upstream 2241541 10972373 ~ 10974413 (-)
G770627 LOC106577876 other upstream 2376996 11107828 ~ 11108159 (-)
G771457 NA other upstream 2897784 11628616 ~ 11629588 (-)

Expression


Co-expression Network