G768893


Basic Information

Item Value
gene id G768893
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 9224584 ~ 9226836 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU875886
GGATCTCAACATTCACACTTGTAAACTACTGAGTATGTAGTGAATAATGTGTTGTCCATGGATGCTAAGTAGTATGGTAGAGATAATATTGTGACATAATGGATTATGAGTGGGTATTGTAAACTACTGAGTATGTAGTGAATAATGTGTGGTCCATGGATGCTAAGTAGTATGGTAGAGATAATATTGTGACATAATGGATTATGAGTGGATATTGTAAACTACTGAGTATGTAGTGAATAATGTGTGGTCCATGGATGCTAAGTAGTATGGTAGAGATAATATTGTGACATagtggagagaaagaaggagcgTTTCTCTTTTTTTCTGCACATTTTATTTGATTATGTTTAACAGTTTAATGGAAAAATACTCGTCTAGCACCCCAGAGTCTCCGTCGTCTACAGAGaagttataaataaataaatactttcTCCAGGCCTCTTCAAGAACACACGCTcactaaacaacaacaacgtCCATCAccacgtagtgtgtgtgtgattgtgaggATCACGTCGGTAAGTTAATGATCCCCAATGTAACACCAAAGGGGTAGGTGTGTGTTTTTAATTCACCAATACTGCCAAGAGAAGACTTAAAACACTCTCAATGAGTCTTGAGTGTCAAGAAAAAAGGACTGAAGTGTTTTTTGAAAAGAGGGCAGCACTTGTTTTTTAGGACGTACTGGGGTTGTTCAGTGGTACCCATATCCCATCCTCTAGGGTCTCAGTGTGTAGGATGGCTGTCTCCCCATAGTGCCTATACCCCAggtccaaccccaaccccaagCCCAGGCTCTCCCATAACCCACTAACCTTCTCTTCTGCCTGGCCTTTCAGTAAAGCCCATACCCCAGGCCCATCCTCCCATGTCCCATCCCTAACCAGTCCAACAAGGTTCTCCTCTATTTCTAGACCAACCACCCAAGCCAAGACTGAGGCTCTTCCCATGTCAATGTGATAGCCCATGGACAGCCCTAACCCCAGCTTTAAGGTTTCCTGGTTGGTTTAATAGTGTCCATAGCCCATGGACAGCCCTAACCCCAGCTTTAAGGTTTCCTGGTTGGTTTAATAGTGTCCATAGCCCATGGACAGCCCTAACCCCAGCTTTAAGGTTTCCTGGTTGGTTTAATAGTGTCCATAGCCCATGGACAGCCCTAACCCCAGCTTTAAGGCTTCTTGGTTGGTTTAATAGTGTCCATAGCCCATGGACAGCCCTAACCCCAGCTTTAAGGTTTCCTGGTTGGTTTAATAGTGTCCATAGCCCATGGAAAGCCCTAACCCCAGCTTTAAGGTTTCCTGGTTGGTTTAATAGTGTCCATAGCCCATGGACAGCCCTAACCTCGGCTTTAAGGCTTCCTGGTTGGTTTAATAGTGTCCATAGCCCATGGAAAGCCCTAACCCCAGCTTTAAGGTTTCCTGGTTGGTTTAATAGTGTCCATAGCCCATGGACAGCCCTAACCTCGGCTTTAAGGCTTCCTGGTTGGTTTAATAGTGTCCATAGCCCATGGAAAGCCCTAACCCCAGCTTTAAGGTTTCCTGGTTGGTTTAATAGTGTCCATAGCCCATGGACAGCCCTAACCCCAGCTTTAAGGCTTCCTGGTTGGTTTAATAGTGTCCATAGCCCATGGACAGCCCTAACCCCAGCTTTAAGGTTTCCTGGTTGGTTTAATAGTGTCCATAGCCCATGGACAGCCCTAACTCCAGCTTTAAGGTTTCCTGGTTGGTTTAATAGTGTCCATAGCCCATGGACAGGCCTAACCCCAGCGTTAAGGTTTCCTGGTTGGTTTAATAGTGTCCATAGCCCATGGACAGCCCTAACCCCAGCTTTAAGGTTTCCTGGTTGGTTTAATAGTGTCCATAGCCCATggacagccctaaccctaaccccagactCTCCCTCAGCCCCCTTAACTGCTCCTCTCCCAGTCTGATCTTCTCCTCCAGCTGTCTCTGTTCCACCAGTAATGCTGCCTTCATCTTCACGTAGTGGCTGTAGTCACGGTGCTGT

Function

NR:

description
PREDICTED: uncharacterized protein LOC106964325 isoform X25

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU875886 True 2013 lncRNA 0.46 2 9224584 9226836

Neighbor

gene id symbol gene type direction distance location
bmp15 LOC106578107 coding downstream 117125 9104234 ~ 9107459 (-)
leap2 leap-2a coding downstream 137287 9083247 ~ 9145704 (-)
phka1a LOC106578056 coding downstream 147221 9023713 ~ 9077363 (-)
LOC118966157 NA coding downstream 507246 8702038 ~ 8717338 (-)
LOC110532904 m1ap coding downstream 539613 8639499 ~ 8684971 (-)
LOC110531417 LOC106578044 coding upstream 67928 9294764 ~ 9348258 (-)
LOC110531429 LOC106578053 coding upstream 756656 9983492 ~ 9988450 (-)
LOC118965989 NA coding upstream 890924 10116536 ~ 10130445 (-)
LOC118965990 NA coding upstream 908693 10135529 ~ 10137709 (-)
LOC110531425 LOC106578047 coding upstream 913787 10140623 ~ 10213285 (-)
G768878 NA non-coding downstream 22828 9200009 ~ 9201756 (-)
G768869 NA non-coding downstream 39140 9184990 ~ 9185444 (-)
G768868 NA non-coding downstream 40235 9183845 ~ 9184349 (-)
G768867 NA non-coding downstream 40769 9183470 ~ 9183815 (-)
G768865 NA non-coding downstream 43659 9180413 ~ 9180925 (-)
G768892 NA non-coding upstream 1888 9228724 ~ 9229132 (-)
G768894 NA non-coding upstream 4041 9230877 ~ 9231132 (-)
G768895 NA non-coding upstream 7454 9234290 ~ 9234584 (-)
G768905 NA non-coding upstream 29168 9256004 ~ 9307991 (-)
G768911 NA non-coding upstream 33751 9260587 ~ 9261653 (-)
G768780 NA other downstream 233878 8982468 ~ 8990706 (-)
LOC110531377 LOC106578102 other downstream 941260 8277882 ~ 8283359 (-)
LOC118936684 LOC106578100 other downstream 971829 8221531 ~ 8253809 (-)
G768390 NA other downstream 1032686 8189443 ~ 8191898 (-)
LOC110510419 LOC106560462 other downstream 1110514 8112588 ~ 8155916 (-)
G770225 NA other upstream 1147873 10367459 ~ 10375854 (-)
G770549 NA other upstream 1745537 10972373 ~ 10974413 (-)
G770627 LOC106577876 other upstream 1880992 11107828 ~ 11108159 (-)
G771457 NA other upstream 2401780 11628616 ~ 11629588 (-)
LOC110531452 LOC106577886 other upstream 2471563 11698392 ~ 11701613 (-)

Expression


Co-expression Network