G770029


Basic Information

Item Value
gene id G770029
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 9951244 ~ 9954280 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU877171
ttgaagtagtagttccccttgctctgcaagggccgcggcttttgtggagcgaggggtgacgatgcttcgtgggtgactgttgttgatgtgtgcagagggtccctggtacgcccccgggtatgggcgaggggacggtctaaagttatactgttacactcatCAGAGCaatgaagacagacaggcaggctggaGATGTACCGTTACCTACAGCCTATGCTAGAAGCTAGACCATAATTCATAAACTCAGTGTTAGGCATAATACTGCAGTGAATTTATCCAGTCAATTTAcacagtgaaatatattttttttcttcagataGTGAAATCATAGTTAGCCAACACTATGTGCGCTCCCGAGGCTGCGCTGAGTGCGGTCCCTCCACGTCCGTGGGTAGCAGCTCTGAAAGCTATCCTATTGTTTTATAGGGACAAGAAATGTACCCTACCTAGGctataacaacacaatgtaatgAATTATGTTATTATTGTTTTCAAGTGCGTACAAAACTCTAGTCTAGGCTATAACTGCAGTGAATACCGTGTGTCATTTGAATAACCGCTCAAAAGCCTGGCGTTTTGAATACATATTAATTTGGAAATAACTCAAACTAACATGCCTGACTGGGCGACCATTTGGATCAGTTATGTGTTTTTAATGAGCAGTTTAGCCTACACGGTCCAGGCACATCAGCAGGACAGTAATACATGGGGTATTTTGTCATGATGTCTCCGCTAACAGAAACATACTAATGCAGGAATTTCTAGTGGCGCGCATATGAATTATGATAATGCGCAAGCGCGGAGAAAGATGTTGCCGTAGTTCCCGCGTTTGGCTTCATCTTTTAAAAGCGTTCGAAAATGAGGTGGACAACTCCCTATACAAACATTTAGTTAATCAATTTCACATTCACAGCTGTGCTTCTACAGTACACTGAAGTTTCTATtagatacagatctaggatcagcttacccacCCTCCAATCGTAACCTTAACTATTAGCGGGAAAACCATAAAACTGCTCTTAGATCATTGTCTAGGATTCAACTTCATCCCCAAACGAGCTGTATGTATACTTAGTTTAGATGTGCTATTAAATGGTGCAGTGTCCCTGTTTATTTGCTATCAGTGGCACATTGAAACAAAAATGCAAAATGAAGTATTTTCAGTGTCTTTCTCCATGTCTTTCTTCATTAGTTTAAAACCCAtacttgaaaaaaatattttttgatgtTACGATTATATCCTCTGCAAGTGTGGTCTCAATATAATTTTGCCCAGGGTGCAACATTATTTCAATCGGCTAAGGGGCCGCTTTTGGATCACGGGCCTGTAGTTTGAGACCCCTGCTCTACAAGCACTGAGCAAATACAGTAAGCATTGTGAGTAACGTTGGATGAAGTGATTTAGGCATCTGTGCATCTGTACAAAGCTACTTCACATAGTACACCACAAGCAGAGGCTTCAGTACAGAATAAAACTGGTCTAATATTGTGATTGAtgactacatttcccacaatacATTGTGCGCTGAAAACTTGCCCTTGAAAATAAGTCAACCCACCGCATCATACTCAAATCTCACTGACCCCCATACGGAGTAGTTGTTGCTCGATGTAAAACTATGTTGTGTTTTATttgatatatttatatatatagtgttttttTTATGATTCTCTTAAAACATCCATTTTAAAACATGAGGCGGTGAAACTGTAAAGCCATATTTAAAAAAGCACTGCACACTGGTATTGTCTTTTGTCAGTTGGGTTTTGTTTGGTTATGAGGttgtttttcttgttgttgtttacaaGTGGAGAAAAGGTGGGATCCTacatttttgttgtgtgtgtgtgtgtgtgtgtgtgtgatcctacGCAGTTTCACACAAATGTGGCATCTCAGGGACGCGTCACAGCACCGCCTCCCCAACACCCCCGCGCTCTGTGGTAAGAATCTACCGGAACCGCGTCTGTTTGAGTTCTAGATTTAGCATTGTTCAGGGCAACCAGCTGAACCTTCCGATAATTGGAGTTGGTTGCCATGGGTATATATTTCCATCTTTTTAGTCACAGTGTGCATTCCAAACGGTACCCTatcctctatatagtgcactactttagaccagagctctacgggcccaggtcaacagtagtgctctacgtagtgaatagggtgccattttggacccCGTAACTCTTCTCAGATGTACTCCTGTCTAGGTTATGTATGAGCCACGTGAAAGAAAGAATTGAGGGAATAACTTAATAAAAAACATATCACCCACCTTCTTGACACAAGCTGACTTGTGCTCCTCAACCAACCCCATTTAGTTTACCTCAGCAAGGTCATAGCCATGGCTTGTAGTGTTGTACTGCTCACTGCTAAGTACTGTAATATGTTTTGTAGTGTACTGCTCACTGCTAAGTACTGTAATATGTTTTGTAGTGTTGTACTGCTCACTGCTAAGTACTGTAATACTGGAGCGTAACATTGATGATTGAATGGTTGATTGACTGGCTAACTGAGtgattgggagggggggggggggggggggggggtgtattctATGGCCTCATTCTTCTCCCCCTTCAGTGTCCATAGATCTGACCGAAGCTAAAACATCATCATAATTGCCTATCCACCTACCAAGTCGTTTCAGATCTGTGAATACAggaaagaaagatagaaagagttTGAGACACAATTCTGTAGAGTGATATTGAGAcagaatttttttggggggggcactaAAATCCCTCCATACACTCCCGTCCTTCCAGACCAAACTAGACCCCATTTCCTCAAAATCCTAACCCCTTGACCTATGACCCCTCTCAGTCGGACCACTCCCCGTTGTCCTCCCCGCCGGAGTCAGACTCTGATTCGCTGTACTCGACAGCGATGCGACGTGAGAGAATGGTGGCCACGTCGTTTCCTACGGGCTCTCTCTTCGcttcctgctctctctgctcctgtACCTTCCTCAATTGG

Function

NR:

description
wiskott-Aldrich syndrome protein family member 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU877171 True 2992 lncRNA 0.43 2 9951244 9954280

Neighbor

gene id symbol gene type direction distance location
LOC110531417 LOC106578044 coding downstream 602986 9294764 ~ 9348258 (-)
bmp15 LOC106578107 coding downstream 843785 9104234 ~ 9107459 (-)
leap2 leap-2a coding downstream 863947 9083247 ~ 9145704 (-)
phka1a LOC106578056 coding downstream 873881 9023713 ~ 9077363 (-)
LOC118966157 NA coding downstream 1233906 8702038 ~ 8717338 (-)
LOC110531429 LOC106578053 coding upstream 29212 9983492 ~ 9988450 (-)
LOC118965989 NA coding upstream 163480 10116536 ~ 10130445 (-)
LOC118965990 NA coding upstream 181249 10135529 ~ 10137709 (-)
LOC110531425 LOC106578047 coding upstream 186343 10140623 ~ 10213285 (-)
LOC110531433 LOC106578048 coding upstream 286945 10241225 ~ 10247265 (-)
G770069 NA non-coding downstream 3477 9947037 ~ 9947767 (-)
G770068 NA non-coding downstream 5439 9945525 ~ 9945805 (-)
G770067 NA non-coding downstream 5771 9945137 ~ 9945473 (-)
G770065 NA non-coding downstream 8287 9941188 ~ 9942957 (-)
G770063 NA non-coding downstream 12322 9933474 ~ 9938922 (-)
G770071 NA non-coding upstream 2178 9956458 ~ 9956754 (-)
G770076 NA non-coding upstream 6967 9961247 ~ 9961470 (-)
G770080 NA non-coding upstream 13416 9967696 ~ 9967899 (-)
G770082 NA non-coding upstream 19930 9974210 ~ 9975108 (-)
G770098 NA non-coding upstream 65165 10019445 ~ 10019665 (-)
G768780 NA other downstream 960538 8982468 ~ 8990706 (-)
LOC110531377 LOC106578102 other downstream 1667920 8277882 ~ 8283359 (-)
LOC118936684 LOC106578100 other downstream 1698489 8221531 ~ 8253809 (-)
G768390 NA other downstream 1759346 8189443 ~ 8191898 (-)
LOC110510419 LOC106560462 other downstream 1837174 8112588 ~ 8155916 (-)
G770225 NA other upstream 420429 10367459 ~ 10375854 (-)
G770549 NA other upstream 1018093 10972373 ~ 10974413 (-)
G770627 LOC106577876 other upstream 1153548 11107828 ~ 11108159 (-)
G771457 NA other upstream 1674336 11628616 ~ 11629588 (-)
LOC110531452 LOC106577886 other upstream 1744119 11698392 ~ 11701613 (-)

Expression


Co-expression Network