G770115


Basic Information

Item Value
gene id G770115
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 10132997 ~ 10160340 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU877277
GTTCTGATAAGGTAGGAAAACAATAAGGTGAAATGTGAGGACATTGGGGTCCTGATAAGGTAGAaaaacaagtacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacgaacacacacatctgctataatgttattttgttttcttttgttacATTTTTCTGAACCTGAGAGAGAATTGCATTATGcggtatatatacatataatatgaTATAATACCCAATGGGGGATTTCATGTATGGAGAAGGAAGGAAGACGATTGGCTGCATGTCTACAGGCCGTCAATGAATTGTCCATTTGATCAGTTGTTGATCGATTGATTGGTCGTCAATGATTCAGAGAATTCTTCTCGTTCTTCCCCCCTCTttgtaaatgtttatttatttatgcaGAAATATAATGATTTTATTAAGCATGGAAATAATACAAAACAATGTTTCAGAATATAATTCAATTATGGGCTTTtattttactg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU877277 True 520 lncRNA 0.36 2 10132997 10160340

Neighbor

gene id symbol gene type direction distance location
LOC118965989 NA coding downstream 2552 10116536 ~ 10130445 (-)
LOC110531429 LOC106578053 coding downstream 144547 9983492 ~ 9988450 (-)
LOC110531417 LOC106578044 coding downstream 784739 9294764 ~ 9348258 (-)
bmp15 LOC106578107 coding downstream 1025538 9104234 ~ 9107459 (-)
leap2 leap-2a coding downstream 1045700 9083247 ~ 9145704 (-)
LOC110531433 LOC106578048 coding upstream 80885 10241225 ~ 10247265 (-)
LOC110531436 LOC106578050 coding upstream 101953 10262293 ~ 10273980 (-)
LOC118965991 NA coding upstream 105457 10265797 ~ 10267703 (-)
LOC118965993 NA coding upstream 501050 10661390 ~ 10664564 (-)
LOC110531427 LOC106577878 coding upstream 511648 10671988 ~ 10695563 (-)
G770140 NA non-coding downstream 32151 10100642 ~ 10100846 (-)
G770139 NA non-coding downstream 32463 10099903 ~ 10100534 (-)
G770118 NA non-coding downstream 94241 10038190 ~ 10038756 (-)
G770099 NA non-coding downstream 112761 10020037 ~ 10020236 (-)
G770173 NA non-coding upstream 21297 10181637 ~ 10182200 (-)
G770174 NA non-coding upstream 24889 10185229 ~ 10186424 (-)
G770183 NA non-coding upstream 73776 10234116 ~ 10234358 (-)
G770112 NA non-coding upstream 77658 10237998 ~ 10238457 (-)
G770110 NA non-coding upstream 79500 10239840 ~ 10241076 (-)
G768780 NA other downstream 1142291 8982468 ~ 8990706 (-)
LOC110531377 LOC106578102 other downstream 1849673 8277882 ~ 8283359 (-)
LOC118936684 LOC106578100 other downstream 1880242 8221531 ~ 8253809 (-)
G768390 NA other downstream 1941099 8189443 ~ 8191898 (-)
LOC110510419 LOC106560462 other downstream 2018927 8112588 ~ 8155916 (-)
G770225 NA other upstream 214369 10367459 ~ 10375854 (-)
G770549 NA other upstream 812033 10972373 ~ 10974413 (-)
G770627 LOC106577876 other upstream 947488 11107828 ~ 11108159 (-)
G771457 NA other upstream 1468276 11628616 ~ 11629588 (-)
LOC110531452 LOC106577886 other upstream 1538059 11698392 ~ 11701613 (-)

Expression


Co-expression Network