G770304


Basic Information

Item Value
gene id G770304
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 10529878 ~ 10531905 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU877503
GATATAATCATTTTCATGACATTGGCAAGACATTATAGCTGCATGTGTTTCAGCCAACAGCTACATAAACCACACTGCTGGATCTGAAAACGAAGGTGGATAACTTTCCTAATCATAATATATGCACttacaattttttatttaaatgatgTCCTTCCAATGAGAAATAACAAAAATAGAATAATTTCAagaactctctctttctttcttttttgagTAGTGTAATACTCTAACCTCTCATTTTGTGTGGGGTAAGGGGGCGTTTTCTGTACCTGTTTTTTACTTCCAACTGTATTACTGTCCTGGGCCCATTtacacaaagcgtctcagagcaagagttctgatctaggatccgttttcacttttaaatcataatgaataagattacatggatacagggtggacctgatcctagatcagcactcctgctctgagatgctttgtggttATGAGTCCTGGTCCTGTACAGCCACAGCTCTGGGAGCAGTATTCTAGTTCTCTGTtataacactgaacaaaaatctaaacacaacatgtaaaatgttggtcccatgtttcgtgagctgaaataaaagatcccagacattttccatacgcatgaaaagcttatttctctcagattttgtgcacaaatttgtttacatccatgttagtgagcatttctcctttgccaaggtaatccattgacctgacaggtgtggcatatcaagaagctgattaaacagcatgatcattacacaggtgcaccttgtgctggggacaataaaaggcagttttgtcacaaaacacaatgccacagatgtctcaagttttgagggagcgtgcaattggccaaggtgcaccttgtgctgggggacaataaaaggcagttttgtcacgcaacacaatgccacagatgtctcaaattttgagggagcgtgcaattggcacaggtgcaccttgtgctgggggacaataaaaggcagttttgtcacacaacccaatgccacagatgtctcaagttttgagggagcgtgcaattggcatgctgactgcaggaatgtccaccagagctgttgccagacaattgaatgttcatttctctaccgtaaaccacctccaatgttgttttaaagaatttggcagtacttccaaccggcctcacaaccgccgATCACGtgcaaccatgccagcccaggacctcaacatccgacttcttcacctgtgggatcgtctgagatcaGTCACCcatcacccggacagctgatgaaactgaggagtatttctgtctgtaataaagtcctattgtgggaaaaaaacacattctgattgtctgggcctggcacccctgcccagttatgtgaaatccatagattagagcttAATGAATTTATgtcaattgaccgatttccttatatgaactgtaactcagtaaaatctttgaaattgttgcgtttatatttttgttcagtatacttagggccaggagttttcccTGACCGCGTGACCTGACTGGGAAAAATTCCAGGCCCCTACTAGTAATAGTTGTAGGCTATTTGCTTTATGACAGCATTTAACTAGGGCCCAGAGATTGTCTTGCATATTCAGGTGATGTGGTGAGGAACACTCCCGTGACAGATACCAGTCAAAATGTTGTGAATTAATGAAATGGTTTGACAGAATGGTATCTCCataaaaaactcctggccctaatcATGCTATCAGCTCTATATGTAATATGAATACAGGCAGTCTGATGGTATTTACATGGTATATACAGATTAACACTTCAACATACTGTTGCTTTAGAGAGTGTGAACAAATCTCAGATGACAGTGTCTCACTAttccagtgcactacttttgaccagagccaatttacccattgaagaaccctttttggttcctggtagacccctttttggttcctggtagaaccctttttggttcctgg

Function

NR:

description
hypothetical protein EH28_23780

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU877503 True 1932 lncRNA 0.42 2 10529878 10531905

Neighbor

gene id symbol gene type direction distance location
LOC110531436 LOC106578050 coding downstream 255898 10262293 ~ 10273980 (-)
LOC118965991 NA coding downstream 262175 10265797 ~ 10267703 (-)
LOC110531433 LOC106578048 coding downstream 282613 10241225 ~ 10247265 (-)
LOC110531425 LOC106578047 coding downstream 316593 10140623 ~ 10213285 (-)
LOC118965990 NA coding downstream 392169 10135529 ~ 10137709 (-)
LOC118965993 NA coding upstream 129485 10661390 ~ 10664564 (-)
LOC110531427 LOC106577878 coding upstream 140083 10671988 ~ 10695563 (-)
LOC110531422 LOC106577877 coding upstream 259288 10791193 ~ 10885360 (-)
LOC110531444 LOC106577924 coding upstream 963637 11495542 ~ 11535439 (-)
LOC110531450 med11 coding upstream 1126759 11658664 ~ 11660833 (-)
G770307 NA non-coding downstream 2038 10527179 ~ 10527840 (-)
G770306 NA non-coding downstream 3024 10525779 ~ 10526854 (-)
G770305 NA non-coding downstream 4197 10524319 ~ 10525681 (-)
G770289 NA non-coding downstream 79271 10448776 ~ 10450607 (-)
G770225 NA non-coding downstream 154024 10367459 ~ 10375854 (-)
G770325 NA non-coding upstream 1057 10532962 ~ 10533195 (-)
G770354 NA non-coding upstream 45727 10577632 ~ 10579758 (-)
G770355 NA non-coding upstream 48117 10580022 ~ 10581181 (-)
G770366 NA non-coding upstream 66228 10598133 ~ 10599243 (-)
G770378 NA non-coding upstream 79592 10611497 ~ 10611950 (-)
G768780 NA other downstream 1539172 8982468 ~ 8990706 (-)
LOC110531377 LOC106578102 other downstream 2246554 8277882 ~ 8283359 (-)
LOC118936684 LOC106578100 other downstream 2277123 8221531 ~ 8253809 (-)
G768390 NA other downstream 2337980 8189443 ~ 8191898 (-)
G770549 NA other upstream 440468 10972373 ~ 10974413 (-)
G770627 LOC106577876 other upstream 575923 11107828 ~ 11108159 (-)
G771457 NA other upstream 1096711 11628616 ~ 11629588 (-)
LOC110531452 LOC106577886 other upstream 1166494 11698392 ~ 11701613 (-)
LOC110532912 LOC106577883 other upstream 1227333 11759145 ~ 11788765 (-)

Expression


Co-expression Network