G770378


Basic Information

Item Value
gene id G770378
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 10611497 ~ 10611950 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU877598
GAGTAACTAATGCTGTTCTAGAATCAGAATCAACTGGTCTAGATCATCAGAGTAACTAATGCTATTCTAGAATCAGAATCAACTGGTCTAGATCATTCGAGTAACTAATGCTGTTCTAGAATCAGAATCAACTGGTCTAGATCATCAGAGTAACTAATGCTATTCTAGAATCAGAATCAACTGGTCTAGAACATTAGAGTAACTAATGCTGAACCAACAACcccctgttataTTACTACAGCTAGTACTGAACCCCCTGGTATATTACTACAGCTAGTACTGAACCCCCTGGTATATTACTACAGCTAAGGTAGCCCTGCTACAAGAACCTGGCCTTTCCACTGGCATTACATTGGGCTGTTTATGCTGAGTGGACAAATGGACTGTGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU877598 True 390 lncRNA 0.40 2 10611497 10611950

Neighbor

gene id symbol gene type direction distance location
LOC110531436 LOC106578050 coding downstream 337517 10262293 ~ 10273980 (-)
LOC118965991 NA coding downstream 343794 10265797 ~ 10267703 (-)
LOC110531433 LOC106578048 coding downstream 364232 10241225 ~ 10247265 (-)
LOC110531425 LOC106578047 coding downstream 398212 10140623 ~ 10213285 (-)
LOC118965990 NA coding downstream 473788 10135529 ~ 10137709 (-)
LOC118965993 NA coding upstream 49440 10661390 ~ 10664564 (-)
LOC110531427 LOC106577878 coding upstream 60038 10671988 ~ 10695563 (-)
LOC110531422 LOC106577877 coding upstream 179243 10791193 ~ 10885360 (-)
LOC110531444 LOC106577924 coding upstream 883592 11495542 ~ 11535439 (-)
LOC110531450 med11 coding upstream 1046714 11658664 ~ 11660833 (-)
G770366 NA non-coding downstream 12254 10598133 ~ 10599243 (-)
G770355 NA non-coding downstream 30316 10580022 ~ 10581181 (-)
G770354 NA non-coding downstream 31739 10577632 ~ 10579758 (-)
G770325 NA non-coding downstream 78302 10532962 ~ 10533195 (-)
G770304 NA non-coding downstream 79592 10529878 ~ 10531905 (-)
G770379 NA non-coding upstream 80 10612030 ~ 10613635 (-)
G770408 LOC106577881 non-coding upstream 46588 10658538 ~ 10660156 (-)
G770421 NA non-coding upstream 99518 10711468 ~ 10711978 (-)
G770424 NA non-coding upstream 103367 10715317 ~ 10715741 (-)
G770435 LOC105030861 non-coding upstream 125751 10737701 ~ 10743190 (-)
G770225 NA other downstream 235643 10367459 ~ 10375854 (-)
G768780 NA other downstream 1620791 8982468 ~ 8990706 (-)
LOC110531377 LOC106578102 other downstream 2328173 8277882 ~ 8283359 (-)
LOC118936684 LOC106578100 other downstream 2358742 8221531 ~ 8253809 (-)
G768390 NA other downstream 2419599 8189443 ~ 8191898 (-)
G770549 NA other upstream 360423 10972373 ~ 10974413 (-)
G770627 LOC106577876 other upstream 495878 11107828 ~ 11108159 (-)
G771457 NA other upstream 1016666 11628616 ~ 11629588 (-)
LOC110531452 LOC106577886 other upstream 1086449 11698392 ~ 11701613 (-)
LOC110532912 LOC106577883 other upstream 1147288 11759145 ~ 11788765 (-)

Expression


Co-expression Network