G770408 (LOC106577881)


Basic Information

Item Value
gene id G770408
gene name LOC106577881
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 10658538 ~ 10660156 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU877643
TCCAGGACCCGTttggccttttagatcataataaataaaaatagacaGGGGAAACCTGATCCACGCTCCTACTATGGGCCCTGAAATGAAACATACCTGAGTTTCCTGCGGAGAAGATAGTCGATGATGTCAGGATCTGTCTGAATGAGACTCATCAGCACCTCTTGTTGGAGCTCTGCTGACACCTGgtgagaagaggacaggagatttacacacacacacacacacacacacaaacacaacccccTTATCCccccagccccacacacacactcttggtACCGTGAATAGTCGCTTATAGTTCTGTATAAGTTGCAGGGTGACGTTGATGATGGCGGCGCTGTCCTCGATGTCCATGGCATGAGGACTCATCTCCCTGTCCCCTCCGCCCCTCTCCCCCTGCAACAGGTTGGGACCAAATATCACCGCCAGGTTAGTTGCTGTCATCTTGTTGCCTaggaactgcacctggtcctgtggtcctgtggtgtcctgtggtcctgtggtgtcctgtggtcctgtggtgtcctgtggtcctgtggtgtcCTGAGCGTGGCTCTGTACGGTGTGTAACAGGGTGAGGAGGCGGAGCAGGGTATCACAGTTACAGGCCGGTAACAGGTAGAGGAGCAGCTGGAGGTACAGGAACTGGTCTGTCCCTTGCAGAACTACAGGACAGATTAGGGGAGACCgaggggacagagatgggttAGATACCCACAGAGAGGACAGATATGGGTTAGAtaccacagagaggacagagatgggttagATAcccacagagaggacagagatgggttagatacccacagagaggagagggatgggttAGATAcccacagagaggacagggatgGGTTAGATAcccacagagaggacagagatgggttagATACCCACAGAGAGTGGGTTAGGAAGCTAATGCCACAGAGATGATCAGCAAAGGGGTAgggtttgtgtgcgtgtgcggaggggttagggggtagggtttgtg

Function

NR:

description
rho GTPase-activating protein 6-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU877643 True 994 lncRNA 0.53 2 10658538 10660156

Neighbor

gene id symbol gene type direction distance location
LOC110531436 LOC106578050 coding downstream 384558 10262293 ~ 10273980 (-)
LOC118965991 NA coding downstream 390835 10265797 ~ 10267703 (-)
LOC110531433 LOC106578048 coding downstream 411273 10241225 ~ 10247265 (-)
LOC110531425 LOC106578047 coding downstream 445253 10140623 ~ 10213285 (-)
LOC118965990 NA coding downstream 520829 10135529 ~ 10137709 (-)
LOC118965993 NA coding upstream 1234 10661390 ~ 10664564 (-)
LOC110531427 LOC106577878 coding upstream 11832 10671988 ~ 10695563 (-)
LOC110531422 LOC106577877 coding upstream 131037 10791193 ~ 10885360 (-)
LOC110531444 LOC106577924 coding upstream 835386 11495542 ~ 11535439 (-)
LOC110531450 med11 coding upstream 998508 11658664 ~ 11660833 (-)
G770379 NA non-coding downstream 44903 10612030 ~ 10613635 (-)
G770378 NA non-coding downstream 46588 10611497 ~ 10611950 (-)
G770366 NA non-coding downstream 59295 10598133 ~ 10599243 (-)
G770355 NA non-coding downstream 77357 10580022 ~ 10581181 (-)
G770354 NA non-coding downstream 78780 10577632 ~ 10579758 (-)
G770421 NA non-coding upstream 51312 10711468 ~ 10711978 (-)
G770424 NA non-coding upstream 55161 10715317 ~ 10715741 (-)
G770435 LOC105030861 non-coding upstream 77545 10737701 ~ 10743190 (-)
G770442 NA non-coding upstream 88424 10748580 ~ 10749467 (-)
G770443 LOC103363173 non-coding upstream 90933 10751089 ~ 10755491 (-)
G770225 NA other downstream 282684 10367459 ~ 10375854 (-)
G768780 NA other downstream 1667832 8982468 ~ 8990706 (-)
LOC110531377 LOC106578102 other downstream 2375214 8277882 ~ 8283359 (-)
LOC118936684 LOC106578100 other downstream 2405783 8221531 ~ 8253809 (-)
G768390 NA other downstream 2466640 8189443 ~ 8191898 (-)
G770549 NA other upstream 312217 10972373 ~ 10974413 (-)
G770627 LOC106577876 other upstream 447672 11107828 ~ 11108159 (-)
G771457 NA other upstream 968460 11628616 ~ 11629588 (-)
LOC110531452 LOC106577886 other upstream 1038243 11698392 ~ 11701613 (-)
LOC110532912 LOC106577883 other upstream 1099082 11759145 ~ 11788765 (-)

Expression


Co-expression Network