G770435 (LOC105030861)


Basic Information

Item Value
gene id G770435
gene name LOC105030861
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 10737701 ~ 10743190 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU877673
CATTGGTCAGCCCCAAGTTCCATTGATTTGAAACGGAGTCAAAATATGCCTTTGCAGTAGCTCCCCTGATGCCTCTTTCTGGCTAGGGTCAAAGGTCAGTGGTGGTGCATCAGGAAGTCTGATTGGTCAGTGGTGGTGCATCATGACGTTGTCGTCGTCCGCCATAGTAACCATAGCCACCGTTCTGACAGTGGAGATCTTCTTCACGGCCTTCTGGAGGAGCAGCTTGAAGTCCTTGATCTCCTGGACAGACCTTATGTAATTCAGTTATTCTTCTTTGTAAGCTGTTGCAGTTTCTCAGCTTTTTTCTTCTTGTACCTCGCTATCTCCTCCATCTGCAGGCCATGAGCCATTTGCCCTTTCTTGAATTCAGGGGGGACGGGGAGAGGTTTCTCAAAGTTGTCCTTCCCTATGAGCCAGTAggtctcctctgttcctccttttccCTTCAGGTCAGTTTTGCCTCTCAGTTGCACCTTGTATCCTGCCTTGAGTTCCAGCAGGattttaactgtgctgttatgGACATGGATTCTGTAGGGCATCCCAGTGGACTCCATACGAGAGGCTGTGGTGACAGTGTCTCCGAACAGACAGTATCTAGGCATGGTCAGTCCCACCACC

Function

NR:

description
PREDICTED: retinal guanylyl cyclase 2 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU877673 True 624 lncRNA 0.50 5 10737701 10743190

Neighbor

gene id symbol gene type direction distance location
LOC110531427 LOC106577878 coding downstream 42138 10671988 ~ 10695563 (-)
LOC118965993 NA coding downstream 73137 10661390 ~ 10664564 (-)
LOC110531436 LOC106578050 coding downstream 463721 10262293 ~ 10273980 (-)
LOC118965991 NA coding downstream 469998 10265797 ~ 10267703 (-)
LOC110531433 LOC106578048 coding downstream 490436 10241225 ~ 10247265 (-)
LOC110531422 LOC106577877 coding upstream 48003 10791193 ~ 10885360 (-)
LOC110531444 LOC106577924 coding upstream 752352 11495542 ~ 11535439 (-)
LOC110531450 med11 coding upstream 915474 11658664 ~ 11660833 (-)
LOC110531452 LOC106577886 coding upstream 955202 11698392 ~ 11701613 (-)
LOC110531453 LOC106577884 coding upstream 998721 11741911 ~ 11750227 (-)
G770424 NA non-coding downstream 21960 10715317 ~ 10715741 (-)
G770421 NA non-coding downstream 25723 10711468 ~ 10711978 (-)
G770408 LOC106577881 non-coding downstream 77545 10658538 ~ 10660156 (-)
G770379 NA non-coding downstream 124066 10612030 ~ 10613635 (-)
G770378 NA non-coding downstream 125751 10611497 ~ 10611950 (-)
G770442 NA non-coding upstream 5390 10748580 ~ 10749467 (-)
G770443 LOC103363173 non-coding upstream 7899 10751089 ~ 10755491 (-)
G770432 NA non-coding upstream 29107 10772297 ~ 10772363 (-)
G770454 NA non-coding upstream 32079 10775269 ~ 10775633 (-)
G770455 NA non-coding upstream 34044 10777234 ~ 10779800 (-)
G770225 NA other downstream 361847 10367459 ~ 10375854 (-)
G768780 NA other downstream 1746995 8982468 ~ 8990706 (-)
LOC110531377 LOC106578102 other downstream 2454377 8277882 ~ 8283359 (-)
LOC118936684 LOC106578100 other downstream 2484946 8221531 ~ 8253809 (-)
G768390 NA other downstream 2545803 8189443 ~ 8191898 (-)
G770549 NA other upstream 229183 10972373 ~ 10974413 (-)
G770627 LOC106577876 other upstream 364638 11107828 ~ 11108159 (-)
G771457 NA other upstream 885426 11628616 ~ 11629588 (-)
LOC110532912 LOC106577883 other upstream 1016048 11759145 ~ 11788765 (-)

Expression


Co-expression Network