G770601


Basic Information

Item Value
gene id G770601
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 11066181 ~ 11077661 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU877865
ttctctctgtgggctaaaaagaggagagagtctgTGTTCCTTCTGTGGGCTAAAAGGAGGTGAGaatctctgtgtgttctctctgtgggCTAAAAGTAGGAGGGAGTCTGTGTGCTCTCTCTGTGAGCTAAAAGGAGGAGAGaatctctgtgtgttctctctgtgggCTAAAAGTAGGAGGGAGTCTGTGTGCTCTCTCTGTGAGCTAAAAGGAGGAAATATTGTGTGTTTTCTCTGTGGGCTAAAAGGAAAAACAACAAGTAGAAGATATCTGGGAGCTGGAATAAATGGATTCAATGAATTAATGACAACATTCCCAAACATTCTGGACAAAATTCCTACTGGGTTTCAATTAGTCAGCGTTCTGAGTTCCGACTCTCACCTGGAGATCCGGGAAATCCTTTGCTTCCGGCTGGTCCAGCAGGACCGGGAAATCCATTGCCTCTGTCTCCAGGAAGTCCGGGAAGACCTAGAGTTCCGGGGTAGCCATCCGTACCGCGCTCACCCTTAGCTCCGGGAATGCCCGACCGACCATCAAAACCTGTGATAATACGGGACACAAGTGGCACATACCTGGAGGGCCAGGTAAACCAGGTTGCCCTGGTAACCCCGCAAAGCCCGAGTCGCCTGGAAACCCACGGGGTCCGATGGAACCCTGGTAGCCAATCCCGTTCTCTCCAGGTTCACCGGCGCGACCTTTGGCGCCTGAGAACCCTGGGAATCCTCTCTCTCCAATGGTTCCATAGCCATCAACATCAGCCTGAGGAGAGGATCATGTCTGTTAAAAGGGATACTTGGGGATTTTGACAATGAGAccttttatctacttccccagagtcagatgaacacgCAGAAACCATcgttatgtctctgtgtgcagtttgaaggaagttgttaACAAGCGCTAACACAATTGGTAATTAGCATTAGcccaatgactggaagtctatggttaCCTGCTAGCAGCATTGGCTCACCAAACTACCTCTAACTTATTTTATACTGGACACAGacataaaaatg

Function

NR:

description
collagen alpha-4(IV) chain-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU877865 True 1023 lncRNA 0.49 2 11066181 11077661

Neighbor

gene id symbol gene type direction distance location
LOC110531422 LOC106577877 coding downstream 180821 10791193 ~ 10885360 (-)
LOC110531427 LOC106577878 coding downstream 370618 10671988 ~ 10695563 (-)
LOC118965993 NA coding downstream 401617 10661390 ~ 10664564 (-)
LOC110531436 LOC106578050 coding downstream 792201 10262293 ~ 10273980 (-)
LOC110531444 LOC106577924 coding upstream 417881 11495542 ~ 11535439 (-)
LOC110531450 med11 coding upstream 581003 11658664 ~ 11660833 (-)
LOC110531452 LOC106577886 coding upstream 620731 11698392 ~ 11701613 (-)
LOC110531453 LOC106577884 coding upstream 664250 11741911 ~ 11750227 (-)
LOC110532912 LOC106577883 coding upstream 681484 11759145 ~ 11788765 (-)
G770533 NA non-coding downstream 120852 10944859 ~ 10945329 (-)
G770525 NA non-coding downstream 138807 10927139 ~ 10927374 (-)
G770518 NA non-coding downstream 151262 10914308 ~ 10914919 (-)
G770470 NA non-coding downstream 253165 10810583 ~ 10813016 (-)
G770472 NA non-coding downstream 253730 10811890 ~ 10812451 (-)
G770607 NA non-coding upstream 1377 11079038 ~ 11079303 (-)
G770608 NA non-coding upstream 3402 11081063 ~ 11081485 (-)
G770613 NA non-coding upstream 9392 11087053 ~ 11087292 (-)
G770614 NA non-coding upstream 9656 11087317 ~ 11087561 (-)
G770616 NA non-coding upstream 12659 11090320 ~ 11090780 (-)
G770549 NA other downstream 91768 10972373 ~ 10974413 (-)
G770225 NA other downstream 690327 10367459 ~ 10375854 (-)
G768780 NA other downstream 2075475 8982468 ~ 8990706 (-)
LOC110531377 LOC106578102 other downstream 2782857 8277882 ~ 8283359 (-)
LOC118936684 LOC106578100 other downstream 2813426 8221531 ~ 8253809 (-)
G770627 LOC106577876 other upstream 30167 11107828 ~ 11108159 (-)
G771457 NA other upstream 550955 11628616 ~ 11629588 (-)
G771540 LOC106577916 other upstream 793827 11870589 ~ 11916867 (-)

Expression


Co-expression Network