Gene
RNA
| Item | Value |
|---|---|
| gene id | G770623 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 11102955 ~ 11103237 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| collagen alpha-4(IV) chain-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU877891 | True | 283 | lncRNA | 0.48 | 1 | 11102955 | 11103237 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110531422 | LOC106577877 | coding | downstream | 217595 | 10791193 ~ 10885360 (-) |
| LOC110531427 | LOC106577878 | coding | downstream | 407392 | 10671988 ~ 10695563 (-) |
| LOC118965993 | NA | coding | downstream | 438391 | 10661390 ~ 10664564 (-) |
| LOC110531436 | LOC106578050 | coding | downstream | 828975 | 10262293 ~ 10273980 (-) |
| LOC110531444 | LOC106577924 | coding | upstream | 392305 | 11495542 ~ 11535439 (-) |
| LOC110531450 | med11 | coding | upstream | 555427 | 11658664 ~ 11660833 (-) |
| LOC110531452 | LOC106577886 | coding | upstream | 595155 | 11698392 ~ 11701613 (-) |
| LOC110531453 | LOC106577884 | coding | upstream | 638674 | 11741911 ~ 11750227 (-) |
| LOC110532912 | LOC106577883 | coding | upstream | 655908 | 11759145 ~ 11788765 (-) |
| G770621 | NA | non-coding | downstream | 1775 | 11100756 ~ 11101180 (-) |
| G770619 | NA | non-coding | downstream | 6712 | 11095939 ~ 11096243 (-) |
| G770616 | NA | non-coding | downstream | 12175 | 11090320 ~ 11090780 (-) |
| G770614 | NA | non-coding | downstream | 15394 | 11087317 ~ 11087561 (-) |
| G770613 | NA | non-coding | downstream | 15663 | 11087053 ~ 11087292 (-) |
| G770624 | NA | non-coding | upstream | 1741 | 11104978 ~ 11105246 (-) |
| G770629 | LOC106577876 | non-coding | upstream | 5267 | 11108504 ~ 11109924 (-) |
| G770590 | LOC106591785 | non-coding | upstream | 19475 | 11122712 ~ 11132322 (-) |
| G770645 | NA | non-coding | upstream | 42272 | 11145509 ~ 11149918 (-) |
| G770686 | NA | non-coding | upstream | 127254 | 11230491 ~ 11230763 (-) |
| G770549 | NA | other | downstream | 128542 | 10972373 ~ 10974413 (-) |
| G770225 | NA | other | downstream | 727101 | 10367459 ~ 10375854 (-) |
| G768780 | NA | other | downstream | 2112249 | 8982468 ~ 8990706 (-) |
| LOC110531377 | LOC106578102 | other | downstream | 2819631 | 8277882 ~ 8283359 (-) |
| LOC118936684 | LOC106578100 | other | downstream | 2850200 | 8221531 ~ 8253809 (-) |
| G770627 | LOC106577876 | other | upstream | 4591 | 11107828 ~ 11108159 (-) |
| G771457 | NA | other | upstream | 525379 | 11628616 ~ 11629588 (-) |
| G771540 | LOC106577916 | other | upstream | 768251 | 11870589 ~ 11916867 (-) |
