G770998


Basic Information

Item Value
gene id G770998
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 11506127 ~ 11512059 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU878314
acatattgtagtggagcagcagtaggtatggtatacatattgtagtggagcagcagtaggtatggtatacatattgtagtggagcagcagtagatatggtatacatattgtagtggagcagcagtagatatggtatacatattgtagtggagcagcagtaggtatggtatacatattgtagtggagcagcagtaggtatggtatacatattgtagtggagcagcagtaggtatggtatacatattgtagtggagcagcagtaggtattatggtatacatattgtagtggagcagcagtaggtattatggtatacatattgtagtggagcagcagtaggtatggtatggtatacatattgtagtggagcagcagtaggtatggtatggtatacatattgtagtggagcagcagtaggtatggtatacatattgtagtggag
>TU878313
TGAATTACTTTTGTTCTTATTCTGTTTGTGTAGAGTATGTCATTCAGAAGTGTGGGTTtgcagtaggtatggtatacatattgtagtggacagcagtaggtatggtatacatattgtagtggagcagcagtaggtattatggtatacatattgtagtggacagcagtagatatggtatacatattgtagtggagcagcagtaggtatggtatacatattgtagtggagcagcagtaggtatggtatacatattgtagtgga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU878314 False 440 lncRNA 0.40 2 11506127 11511139
TU878313 True 261 lncRNA 0.38 2 11510162 11512059

Neighbor

gene id symbol gene type direction distance location
LOC110531422 LOC106577877 coding downstream 620767 10791193 ~ 10885360 (-)
LOC110531427 LOC106577878 coding downstream 810564 10671988 ~ 10695563 (-)
LOC118965993 NA coding downstream 841563 10661390 ~ 10664564 (-)
LOC110531436 LOC106578050 coding downstream 1232147 10262293 ~ 10273980 (-)
LOC110531450 med11 coding upstream 146605 11658664 ~ 11660833 (-)
LOC110531452 LOC106577886 coding upstream 186333 11698392 ~ 11701613 (-)
LOC110531453 LOC106577884 coding upstream 229852 11741911 ~ 11750227 (-)
LOC110532912 LOC106577883 coding upstream 247086 11759145 ~ 11788765 (-)
trnal-aag NA coding upstream 458110 11970169 ~ 11970250 (-)
G770993 NA non-coding downstream 4850 11500981 ~ 11501277 (-)
G770841 NA non-coding downstream 148442 11357318 ~ 11357685 (-)
G770784 NA non-coding downstream 252051 11252758 ~ 11254076 (-)
G770779 NA non-coding downstream 267468 11238247 ~ 11238659 (-)
G770689 NA non-coding downstream 272415 11233501 ~ 11233712 (-)
G770982 hmgb3 non-coding upstream 35789 11547848 ~ 11551525 (-)
G770986 NA non-coding upstream 40643 11552702 ~ 11552914 (-)
G771017 NA non-coding upstream 41042 11553101 ~ 11553442 (-)
G771019 NA non-coding upstream 42373 11554432 ~ 11554803 (-)
G771417 NA non-coding upstream 48103 11560162 ~ 11560391 (-)
G770627 LOC106577876 other downstream 397968 11107828 ~ 11108159 (-)
G770549 NA other downstream 531714 10972373 ~ 10974413 (-)
G770225 NA other downstream 1130273 10367459 ~ 10375854 (-)
G768780 NA other downstream 2515421 8982468 ~ 8990706 (-)
LOC110531377 LOC106578102 other downstream 3222803 8277882 ~ 8283359 (-)
G771457 NA other upstream 116557 11628616 ~ 11629588 (-)
G771540 LOC106577916 other upstream 359429 11870589 ~ 11916867 (-)
G771614 NA other upstream 458845 11970904 ~ 11971354 (-)

Expression


Co-expression Network