G771512 (LOC106613431)


Basic Information

Item Value
gene id G771512
gene name LOC106613431
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 11751763 ~ 11752742 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU878977
gaacatcacacctgcgggacaggtacaggatggcaacaacaactgcccgagttacaccaggaatgcacaatccctccatcagtgctcagactgtccgcaataggctgagagaggctggactgagggcttgtagtcctgttgtaaggcaggtcctcaccagacatcaccggcaacaacgtcgcctatgagcacaaacccaccgtcgctggaccagacaggactggcaaaaagtgctcttcactgacgagtctcggttttgtctcatcagtggtgatggtcagattcaagtttatcgtcgaaggaatgagcgttacaccgaggcctgtactctggagcgggatcgatttggaggtggagggtccgtcatggtctggggcggtgtctcacagcatcatcggactgagcttgtcattgcaggcaatctcaacacgtgcgttacagggaagacatcctactcttcctgcaggctcatcctgagatgaccctccagcatgacaatgccaccagccatagtgcttgttctgtgtgtgatttcctgcaagacaggaatgtcagtgttctgccatggccagcaaagagcccggatctcaatcccattgagcacatctgggacctgttggatcggagggtgagggctagggccattcccccccagaaatgtccggaaacttgcaggtgccttggttgaagagtggggtaacatctcacagcaagaactggcaaatctggtgcagtccatgaggaggagatgcactgcagtacttaatgcagctggtggccacaccagatactgactgttactttagattttgaccccccctttgttcagggacacattattcaatttctgtggaacttgttcagtttatgtctcagttcttgaatcttgttatgttcatacaaatatttacacatgttaagtttgctgaaaataaacacagttgacagtgagaggacatttctttttttgatgagtttat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU878977 True 980 lncRNA 0.50 1 11751763 11752742

Neighbor

gene id symbol gene type direction distance location
LOC110531453 LOC106577884 coding downstream 1536 11741911 ~ 11750227 (-)
LOC110531452 LOC106577886 coding downstream 50150 11698392 ~ 11701613 (-)
LOC110531450 med11 coding downstream 90930 11658664 ~ 11660833 (-)
LOC110531444 LOC106577924 coding downstream 216324 11495542 ~ 11535439 (-)
LOC110531422 LOC106577877 coding downstream 866403 10791193 ~ 10885360 (-)
LOC110532912 LOC106577883 coding upstream 6403 11759145 ~ 11788765 (-)
trnal-aag NA coding upstream 217427 11970169 ~ 11970250 (-)
LOC110531465 LOC107666294 coding upstream 373485 12092145 ~ 12144786 (-)
LOC110531459 LOC106577897 coding upstream 394752 12147494 ~ 12153015 (-)
trnas-uga-2 NA coding upstream 432890 12185486 ~ 12185735 (-)
G771501 NA non-coding downstream 28556 11722993 ~ 11723207 (-)
G771500 NA non-coding downstream 29996 11721524 ~ 11721767 (-)
G771498 NA non-coding downstream 33242 11718265 ~ 11718521 (-)
G771495 NA non-coding downstream 39520 11709363 ~ 11712243 (-)
G771463 NA non-coding downstream 71706 11679770 ~ 11680057 (-)
G771514 NA non-coding upstream 2671 11755413 ~ 11755662 (-)
G771517 NA non-coding upstream 20477 11773219 ~ 11773986 (-)
G771540 LOC106577916 non-coding upstream 117847 11870589 ~ 11916867 (-)
G771566 LOC106577917 non-coding upstream 123675 11876417 ~ 11925499 (-)
G771567 LOC106577915 non-coding upstream 126159 11878901 ~ 11881125 (-)
G771457 NA other downstream 122175 11628616 ~ 11629588 (-)
G770627 LOC106577876 other downstream 643604 11107828 ~ 11108159 (-)
G770549 NA other downstream 777350 10972373 ~ 10974413 (-)
G770225 NA other downstream 1375909 10367459 ~ 10375854 (-)
G771614 NA other upstream 218162 11970904 ~ 11971354 (-)
G772877 LOC106577934 other upstream 1241527 12994269 ~ 12996410 (-)
G773163 NA other upstream 1837511 13586326 ~ 13666937 (-)

Expression


Co-expression Network