G771602


Basic Information

Item Value
gene id G771602
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 11945296 ~ 11946601 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU879085
atACTATTGCTGTAGACATCtgctcttttattttttatttttctacttcacctttatttaaccaggtaggcaagttgagaacaagttctcatttacaactacgacctggccaggataaagcaaagcagtttgacacatacagcaacagagttacacatggaattaacaaacatacagtcaataatacaatagcaAAAGTatatatgcagtgtgtgcaaatgaggtaggataggggaggtaaggcaataaataggccatagtggcgaagtaattacaatataccaattaagcactggagtgatagatgtgcaggagatgaatgtgcaagtagagatactggagtgcaaaggagcaagataaataaataaatacagtatggggatgaggtagttggatgagctatttacagataggctatgtacaggggcagtgttctgtgagctgctctgacagccggtgcttaaagctagtgaggaacatatgagtctccaacttcagtgatttttgccgttcattccagtcattggcagcagagaactggaaggaaaggcggccaaatgaggaattggatttgggggtaaccagtgagatatacctgctggagcgcgtgctacaggtgggtgctgctctggtaaccattgagctgagataaggcagggttttacctagcaaagacttgtagataacctggagccagtgggtttggcgatgagtatgaagcgagggccagccaacgagagtgtacaggtcgcagtggtgggttgtatatggggctttggtgacaaaacggatggcactgtgatagactgcatccaattggttgagtagagtgttggaggctattttgtagatttTGTAGAGGATCGgttggatggtcagttttacgagggtatgtttggcagcatgagtgaagaatgctttgttgtgaaattggaagccgattctagatttaattttggattggagatgcttaatgtgagtctggaaggagagtttacagtctacccagacacctaggtatatgtagttgtccatatattctaagtctaaaccgtccagagttgtgatgctggacgggcgggcaggtgcgggcagcaatcggttgaagagcatgcatttagtttgacttgcatttaagagcagttggaggccacggaaggaaagttgtatggcattgaagctcgtctggaggttagttaacacagtgtccagcgAAGGGccagaatcaaatcaaagtttatttgtcacgcgccgaatacaacaggtgtagaccttaaagtgaaatgcttacttacaggctctaacc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU879085 True 1306 lncRNA 0.44 1 11945296 11946601

Neighbor

gene id symbol gene type direction distance location
LOC110532912 LOC106577883 coding downstream 156531 11759145 ~ 11788765 (-)
LOC110531453 LOC106577884 coding downstream 195069 11741911 ~ 11750227 (-)
LOC110531452 LOC106577886 coding downstream 243683 11698392 ~ 11701613 (-)
LOC110531450 med11 coding downstream 284463 11658664 ~ 11660833 (-)
LOC110531444 LOC106577924 coding downstream 409857 11495542 ~ 11535439 (-)
trnal-aag NA coding upstream 23568 11970169 ~ 11970250 (-)
LOC110531465 LOC107666294 coding upstream 179626 12092145 ~ 12144786 (-)
LOC110531459 LOC106577897 coding upstream 200893 12147494 ~ 12153015 (-)
trnas-uga-2 NA coding upstream 239031 12185486 ~ 12185735 (-)
trnaw-cca-4 NA coding upstream 252106 12198707 ~ 12198778 (-)
G771601 NA non-coding downstream 964 11944088 ~ 11944332 (-)
G771600 NA non-coding downstream 2046 11942774 ~ 11943250 (-)
G771599 NA non-coding downstream 3416 11941681 ~ 11941880 (-)
G771598 NA non-coding downstream 3866 11941162 ~ 11941430 (-)
G771597 NA non-coding downstream 5397 11939646 ~ 11939899 (-)
G771603 NA non-coding upstream 1410 11948011 ~ 11949292 (-)
G771608 NA non-coding upstream 8051 11954652 ~ 11962553 (-)
G771613 NA non-coding upstream 23002 11969603 ~ 11970011 (-)
G771615 NA non-coding upstream 24979 11971580 ~ 11971856 (-)
G771618 NA non-coding upstream 32288 11978889 ~ 11979216 (-)
G771540 LOC106577916 other downstream 56581 11870589 ~ 11916867 (-)
G771457 NA other downstream 315708 11628616 ~ 11629588 (-)
G770627 LOC106577876 other downstream 837137 11107828 ~ 11108159 (-)
G771614 NA other upstream 24303 11970904 ~ 11971354 (-)
G772877 LOC106577934 other upstream 1047668 12994269 ~ 12996410 (-)
G773163 NA other upstream 1643652 13586326 ~ 13666937 (-)
G773168 NA other upstream 1750578 13697179 ~ 13699328 (-)
LOC110531538 NA other upstream 2033727 13977459 ~ 13987582 (-)

Expression


Co-expression Network