G771603


Basic Information

Item Value
gene id G771603
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 11948011 ~ 11949292 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU879086
CGGTAATAAAAATGAAACAATAATTTAATGTACACATTTTAAGATACATTCTGCGATTTGGAAAAAAATTGCAAAATGGCCAACCCCCCTTATAAAAACAAacacatgattccacatgtggaAAATCACCATGTTTTTACATGTGAAATTCTCACATATTGCACATGTGAAACCATGTGGCTTtagaacacttcacatgtgatgaTATATCACATGAAGTTTCACATCTCACATGTGGATTTTCACGTGATCACACAACCTTTCACATGTGAATTCACATTTTAACATGATGCCATGCAAACATTCTGGATCCGTTCTGAGCATTTCACGGCTACGTTGTGACAATGACTTATCAGTGGCCCAAGCACTGCTCagataatccctaccattgtgtcacaGAGTTGTTGTAGTAGTGCTGCAAATGTACATTGTCCCAGGGGTGTTGGCAGTAAGTAACCTAATGTATGTCCCTCTAACTCCCCTGAATGCCTCTGTCAGTCATACAgctattgtattttatttacatttatttgacatttatttaactaggcaagtcagttaagaacaaattcgtattacCAAAAGGCAAATAACCTCCTGCGGAAACAGGGGATTAAGCAGCAATCATCCGACTGTGAACCTGAGTTATACTTTGGACTGAGGCTGTTTGCCCTAGTCCACATCGGCTCAAACATATCACGTCATGTCTACCTCTGATAAGCctcccagtaaagcaataaaaacaataaatattcccagaaaagtgctaaaaatagcccacattaacatacactatgtagcctaagaaagaaggttcatgaaatcgataacttgctagtaacagaCAACACTCATatactgactatctctgaaactcacttagataataacCTTTgctgatacagtggtagcaatacatctTTTCAATATCttcagaagagacaggaatgccaATGGTGGATTTGTTGCCATTGTTGTTCAGTCATATTCCTGTAAAACTTAGCGAGGATCTCTTGTCAAATGCTGTTGAAGTAGTATGGCTAGAGGTTCACATGTCTCACCTGAAGCCTGCTAtaaaccaccaagtgctaacagaaAGTATCTAGATACAATGTTTGAATTGCTTGATAATCTACACTACATGTATGTGTACACCTGttggtcgaacatctcattccaaaatcatgggcattaatatggagttggtcccccctttgctgctataacagcctccactcttctgggaaagctttccactagatgttggaacattgctgcgggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU879086 True 1282 lncRNA 0.39 1 11948011 11949292

Neighbor

gene id symbol gene type direction distance location
LOC110532912 LOC106577883 coding downstream 159246 11759145 ~ 11788765 (-)
LOC110531453 LOC106577884 coding downstream 197784 11741911 ~ 11750227 (-)
LOC110531452 LOC106577886 coding downstream 246398 11698392 ~ 11701613 (-)
LOC110531450 med11 coding downstream 287178 11658664 ~ 11660833 (-)
LOC110531444 LOC106577924 coding downstream 412572 11495542 ~ 11535439 (-)
trnal-aag NA coding upstream 20877 11970169 ~ 11970250 (-)
LOC110531465 LOC107666294 coding upstream 176935 12092145 ~ 12144786 (-)
LOC110531459 LOC106577897 coding upstream 198202 12147494 ~ 12153015 (-)
trnas-uga-2 NA coding upstream 236340 12185486 ~ 12185735 (-)
trnaw-cca-4 NA coding upstream 249415 12198707 ~ 12198778 (-)
G771602 NA non-coding downstream 1410 11945296 ~ 11946601 (-)
G771601 NA non-coding downstream 3679 11944088 ~ 11944332 (-)
G771600 NA non-coding downstream 4761 11942774 ~ 11943250 (-)
G771599 NA non-coding downstream 6131 11941681 ~ 11941880 (-)
G771598 NA non-coding downstream 6581 11941162 ~ 11941430 (-)
G771608 NA non-coding upstream 5360 11954652 ~ 11962553 (-)
G771613 NA non-coding upstream 20311 11969603 ~ 11970011 (-)
G771615 NA non-coding upstream 22288 11971580 ~ 11971856 (-)
G771618 NA non-coding upstream 29597 11978889 ~ 11979216 (-)
G771620 NA non-coding upstream 31217 11980509 ~ 11980962 (-)
G771540 LOC106577916 other downstream 59296 11870589 ~ 11916867 (-)
G771457 NA other downstream 318423 11628616 ~ 11629588 (-)
G770627 LOC106577876 other downstream 839852 11107828 ~ 11108159 (-)
G771614 NA other upstream 21612 11970904 ~ 11971354 (-)
G772877 LOC106577934 other upstream 1044977 12994269 ~ 12996410 (-)
G773163 NA other upstream 1640961 13586326 ~ 13666937 (-)
G773168 NA other upstream 1747887 13697179 ~ 13699328 (-)
LOC110531538 NA other upstream 2031036 13977459 ~ 13987582 (-)

Expression


Co-expression Network